Information for 10-AARATAGATACAG (Motif 20)

C G T A C G T A C T A G C G T A A C G T C G T A A C T G T C G A C A G T C G T A A G T C G C T A T A C G
Reverse Opposite:
A G T C C A G T T A C G A C G T G C T A A G C T A G T C A C G T C G T A C G A T A G T C A C G T A C G T
p-value:1e-6
log p-value:-1.540e+01
Information Content per bp:1.741
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif21.05%
Number of Background Sequences with motif122.7
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets41.8 +/- 12.7bp
Average Position of motif in Background46.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------AARATAGATACAG
ATGCTAAAAATAGAA----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G C G T A A C G T C G T A A C T G T C G A C A G T C G T A A G T C G C T A T A C G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AARATAGATACAG
DCYAAAAATAGM-----
 A C G T A C G T A C G T A C G T C G T A C G T A C T A G C G T A A C G T C G T A A C T G T C G A C A G T C G T A A G T C G C T A T A C G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AARATAGATACAG
CCAAAAATAG------
 A C G T A C G T A C G T C G T A C G T A C T A G C G T A A C G T C G T A A C T G T C G A C A G T C G T A A G T C G C T A T A C G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AARATAGATACAG
KCCAAAAATAGC-----
 A C G T A C G T A C G T A C G T C G T A C G T A C T A G C G T A A C G T C G T A A C T G T C G A C A G T C G T A A G T C G C T A T A C G
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----AARATAGATACAG
GCTAAAAATAGC-----
 A C G T A C G T A C G T A C G T C G T A C G T A C T A G C G T A A C G T C G T A A C T G T C G A C A G T C G T A A G T C G C T A T A C G
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AARATAGATACAG
TCTAAAAATAGA-----
 A C G T A C G T A C G T A C G T C G T A C G T A C T A G C G T A A C G T C G T A A C T G T C G A C A G T C G T A A G T C G C T A T A C G
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AARATAGATACAG
ACTATAAATAGA-----
 A C G T A C G T A C G T A C G T C G T A C G T A C T A G C G T A A C G T C G T A A C T G T C G A C A G T C G T A A G T C G C T A T A C G
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AARATAGATACAG
AAAAAATCGATAAT-
 A C G T A C G T C G T A C G T A C T A G C G T A A C G T C G T A A C T G T C G A C A G T C G T A A G T C G C T A T A C G
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AARATAGATACAG
AAAAAATCGATAAT-
 A C G T A C G T C G T A C G T A C T A G C G T A A C G T C G T A A C T G T C G A C A G T C G T A A G T C G C T A T A C G
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AARATAGATACAG
GCTATAAATAGC-----
 A C G T A C G T A C G T A C G T C G T A C G T A C T A G C G T A A C G T C G T A A C T G T C G A C A G T C G T A A G T C G C T A T A C G
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T A C G T A C G T A C G T A C G T