Information for 17-GGAVGVAVAAAAAATB (Motif 29)

A C T G A T C G G T C A T C G A A T C G T A C G G T C A T G C A T G C A C G T A C T G A T G C A G T C A C G T A A C G T A C T G
Reverse Opposite:
T A G C T G C A C G A T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A G T C A T G C A C G T A C G T A T G C G T A C
p-value:1e-4
log p-value:-1.127e+01
Information Content per bp:1.641
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif107.8
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets63.8 +/- 16.3bp
Average Position of motif in Background48.4 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAVGVAVAAAAAATB-
GTTAAAAAAAAAAATTA
 A C T G A T C G G T C A T C G A A T C G T A C G G T C A T G C A T G C A C G T A C T G A T G C A G T C A C G T A A C G T A C T G A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0186.1_Tcf3_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAVGVAVAAAAAATB
AGCCGAAAAAAAAAT-
 A C T G A T C G G T C A T C G A A T C G T A C G G T C A T G C A T G C A C G T A C T G A T G C A G T C A C G T A A C G T A C T G
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGAVGVAVAAAAAATB-
--AACAAACAACAAGAG
 A C T G A T C G G T C A T C G A A T C G T A C G G T C A T G C A T G C A C G T A C T G A T G C A G T C A C G T A A C G T A C T G A C G T
A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGAVGVAVAAAAAATB
--TACTGGAAAAAAAA
 A C T G A T C G G T C A T C G A A T C G T A C G G T C A T G C A T G C A C G T A C T G A T G C A G T C A C G T A A C G T A C T G
A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GGAVGVAVAAAAAATB
--------NAACAAT-
 A C T G A T C G G T C A T C G A A T C G T A C G G T C A T G C A T G C A C G T A C T G A T G C A G T C A C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GGAVGVAVAAAAAATB
----AAACAAACATTC
 A C T G A T C G G T C A T C G A A T C G T A C G G T C A T G C A T G C A C G T A C T G A T G C A G T C A C G T A A C G T A C T G
A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GGAVGVAVAAAAAATB-
GTTCAAAAAAAAAATTC
 A C T G A T C G G T C A T C G A A T C G T A C G G T C A T G C A T G C A C G T A C T G A T G C A G T C A C G T A A C G T A C T G A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:GGAVGVAVAAAAAATB
-----AATAAACAATN
 A C T G A T C G G T C A T C G A A T C G T A C G G T C A T G C A T G C A C G T A C T G A T G C A G T C A C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.48
Offset:6
Orientation:forward strand
Alignment:GGAVGVAVAAAAAATB-----
------GAAAAAATTGCAAGG
 A C T G A T C G G T C A T C G A A T C G T A C G G T C A T G C A T G C A C G T A C T G A T G C A G T C A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0066.1_Sox17_1/Jaspar

Match Rank:10
Score:0.47
Offset:6
Orientation:forward strand
Alignment:GGAVGVAVAAAAAATB-----
------ATAAACAATTAAACA
 A C T G A T C G G T C A T C G A A T C G T A C G G T C A T G C A T G C A C G T A C T G A T G C A G T C A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A