Information for 4-VACGTDGHGTTGAGGC (Motif 6)

T C A G C G T A T G A C C T A G A C G T C A G T A C T G G C T A T A C G A G C T A C G T C T A G C T G A A C T G A C T G A G T C
Reverse Opposite:
C T A G A G T C A G T C A G C T A G T C C G T A C T G A A T G C C A G T A G T C G C T A T G C A A G T C A C T G A C G T A G T C
p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.722
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets20.0 +/- 2.2bp
Average Position of motif in Background45.3 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B/MA0811.1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:VACGTDGHGTTGAGGC-
-----TGCCCTNGGGCA
 T C A G C G T A T G A C C T A G A C G T C A G T A C T G G C T A T A C G A G C T A C G T C T A G C T G A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:VACGTDGHGTTGAGGC--
----NTGCCCTAGGGCAA
 T C A G C G T A T G A C C T A G A C G T C A G T A C T G G C T A T A C G A G C T A C G T C T A G C T G A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:VACGTDGHGTTGAGGC
----ATGCCCTGAGGC
 T C A G C G T A T G A C C T A G A C G T C A G T A C T G G C T A T A C G A G C T A C G T C T A G C T G A A C T G A C T G A G T C
A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

TFAP2C/MA0524.2/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:VACGTDGHGTTGAGGC-
-----TGCCCTNGGGCA
 T C A G C G T A T G A C C T A G A C G T C A G T A C T G G C T A T A C G A G C T A C G T C T A G C T G A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:VACGTDGHGTTGAGGC-
-----TGCCCNGGGGCA
 T C A G C G T A T G A C C T A G A C G T C A G T A C T G G C T A T A C G A G C T A C G T C T A G C T G A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:VACGTDGHGTTGAGGC--
----NTGCCCANNGGTNA
 T C A G C G T A T G A C C T A G A C G T C A G T A C T G G C T A T A C G A G C T A C G T C T A G C T G A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:VACGTDGHGTTGAGGC--
----NTGCCCTTGGGCGN
 T C A G C G T A T G A C C T A G A C G T C A G T A C T G G C T A T A C G A G C T A C G T C T A G C T G A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:VACGTDGHGTTGAGGC
----WTGSCCTSAGGS
 T C A G C G T A T G A C C T A G A C G T C A G T A C T G G C T A T A C G A G C T A C G T C T A G C T G A A C T G A C T G A G T C
A C G T A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:forward strand
Alignment:VACGTDGHGTTGAGGC--
---GGTCANYTGAGGWCA
 T C A G C G T A T G A C C T A G A C G T C A G T A C T G G C T A T A C G A G C T A C G T C T A G C T G A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.50
Offset:7
Orientation:forward strand
Alignment:VACGTDGHGTTGAGGC--
-------GTCTGTGGTTT
 T C A G C G T A T G A C C T A G A C G T C A G T A C T G G C T A T A C G A G C T A C G T C T A G C T G A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T