Homer de novo Motif Results (hs_HepatocellularCarcin_HepG2_Cancer_HNF4A_SRX018625_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 764
Total background sequences = 47448
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G A C T C T A G T C A G T G C A A G T C G A C T G A C T C G A T T C A G T C G A G T C A G A T C G A C T 1e-376-8.678e+0254.19%3.58%22.4bp (31.9bp)HNF4G/MA0484.1/Jaspar(0.984)
More Information | Similar Motifs Found		motif file (matrix)
2 T G A C T C G A T C G A C T G A C A T G A T G C A G C T G T A C G T C A C T G A C T A G A T C G A G C T G A T C C G T A A T C G 1e-34-8.048e+016.81%0.63%23.6bp (32.0bp)Nr5a2/MA0505.1/Jaspar(0.924)
More Information | Similar Motifs Found		motif file (matrix)
3 G C A T C T A G C G T A C T A G A G C T G T C A T C G A C T G A A G T C G T C A 1e-30-6.915e+0116.36%5.03%25.8bp (32.6bp)FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.958)
More Information | Similar Motifs Found		motif file (matrix)
4 A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C C G T A 1e-16-3.746e+010.92%0.00%27.5bp (16.6bp)THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer(0.620)
More Information | Similar Motifs Found		motif file (matrix)
5 T C A G T C G A C G A T G A C T G T A C G T C A A T G C C G T A T A C G C T G A A C G T A T G C G T C A 1e-14-3.329e+012.62%0.23%28.6bp (28.6bp)Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer(0.644)
More Information | Similar Motifs Found		motif file (matrix)
6 C G T A C T A G A C G T A C G T C G T A C G T A C G T A T G C A C G A T C G A T C G A T C G T A C G T A 1e-14-3.263e+011.05%0.01%29.8bp (21.5bp)Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer(0.866)
More Information | Similar Motifs Found		motif file (matrix)
7 C G A T A T C G C T G A A C G T T G A C C T A G C A T G C G T A A C T G A C G T A G T C G T A C C G T A 1e-13-3.213e+012.62%0.24%25.8bp (37.0bp)PB0134.1_Hnf4a_2/Jaspar(0.635)
More Information | Similar Motifs Found		motif file (matrix)
8 G T C A A G T C G T A C A G C T A G T C G T C A A G C T A C T G A C G T C G A T A C T G T G A C T C G A 1e-13-3.172e+011.83%0.09%27.4bp (25.7bp)SCRT1/MA0743.1/Jaspar(0.652)
More Information | Similar Motifs Found		motif file (matrix)
9 A C T G G T C A A G T C A G T C C G A T A G T C C A G T A G T C A G T C C G T A C A T G A C T G A G T C 1e-13-3.138e+010.79%0.00%28.2bp (17.2bp)GLI2/MA0734.1/Jaspar(0.588)
More Information | Similar Motifs Found		motif file (matrix)
10 C A G T C T G A C T A G A C G T A G T C G T A C C G T A C G T A T G C A C T G A T A C G C T G A A C T G A T G C G C T A A T C G 1e-12-2.941e+012.49%0.24%22.8bp (30.7bp)Rarg/MA0859.1/Jaspar(0.659)
More Information | Similar Motifs Found		motif file (matrix)
11 * C G A T C T A G C T G A C T G A T A G C G T A C A G T C G T C A T C G A A G T C C G T A A C T G C A T G C T A G G C T A C G T A 1e-11-2.752e+011.44%0.06%18.7bp (23.8bp)ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer(0.578)
More Information | Similar Motifs Found		motif file (matrix)
12 * A G T C A G T C C G T A A C T G A C T G A T C G A C T G A C T G G A C T A C T G A G T C A C G T A C T G A C G T A C G T A C G T 1e-11-2.724e+010.79%0.01%11.4bp (4.0bp)INSM1/MA0155.1/Jaspar(0.553)
More Information | Similar Motifs Found		motif file (matrix)
13 * A G T C G T C A A G T C C G T A A C T G T G A C C G A T A C T G C G T A A T C G G A T C C T G A C G T A G T C A A C G T A T C G 1e-11-2.724e+010.79%0.01%18.8bp (9.8bp)POL009.1_DCE_S_II/Jaspar(0.632)
More Information | Similar Motifs Found		motif file (matrix)
14 * T A G C T G A C T A G C G T A C C A G T G A T C T A G C G T A C T A G C A G T C 1e-11-2.636e+016.68%2.16%24.7bp (25.1bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.870)
More Information | Similar Motifs Found		motif file (matrix)
15 * G T C A C G T A A G T C C G T A A C T G A C T G C G T A A C G T G T A C A T G C A C G T A C T G A C G T 1e-11-2.545e+010.65%0.00%25.5bp (17.5bp)SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer(0.638)
More Information | Similar Motifs Found		motif file (matrix)
16 * C G T A A C T G A C T G C T A G A C G T A C T G C T G A C T A G A C T G A G T C C G T A A T G C C G T A 1e-11-2.545e+010.65%0.00%27.1bp (6.9bp)KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer(0.709)
More Information | Similar Motifs Found		motif file (matrix)
17 * A C G T A C T G A C G T A C T G A C T G G T C A A C G T C G A T A G C T A G T C A G C T C A T G A C T G A G T C A C G T A G T C 1e-11-2.545e+010.65%0.00%24.4bp (0.0bp)RUNX1/MA0002.2/Jaspar(0.618)
More Information | Similar Motifs Found		motif file (matrix)
18 * G T C A A G T C C G T A A C T G A C T G G A C T A C G T A C G T C T G A C T G A A G T C C G T A A C T G C T A G A C G T A G T C 1e-11-2.545e+010.65%0.00%25.2bp (0.0bp)PH0140.1_Pknox1/Jaspar(0.709)
More Information | Similar Motifs Found		motif file (matrix)
19 * A C T G C A T G C T A G G T C A T C G A C G A T A C T G A G T C C T G A C T A G T C A G A T G C A G C T G A T C A C G T A C T G 1e-11-2.545e+010.65%0.00%24.6bp (4.6bp)TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer(0.563)
More Information | Similar Motifs Found		motif file (matrix)
20 * A C G T A C G T C T G A C G A T C T A G T G A C C G T A C G T A G A T C T C A G A G C T A C G T C T A G 1e-10-2.427e+012.36%0.29%26.0bp (30.8bp)CEBPA/MA0102.3/Jaspar(0.737)
More Information | Similar Motifs Found		motif file (matrix)
21 * C G A T A T G C G T C A A G T C C T A G C A G T A T C G C G T A G T C A A T G C 1e-10-2.415e+014.06%0.95%23.8bp (31.8bp)E-box(bHLH)/Promoter/Homer(0.859)
More Information | Similar Motifs Found		motif file (matrix)
22 * A C G T A G T C A G T C G C T A C G A T A G T C A T G C A G T C A T G C C G A T A C T G A C T G C G T A 1e-9-2.221e+011.05%0.03%26.1bp (16.2bp)ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer(0.649)
More Information | Similar Motifs Found		motif file (matrix)
23 * A G T C A C G T C G T A A C T G A G T C A C G T G T C A A C T G C G T A A T G C 1e-9-2.200e+010.65%0.00%18.5bp (16.5bp)SMAD3/MA0795.1/Jaspar(0.615)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C G T C G T A A C T G C A T G A C T G C T G A T A G C C G T A G A C T T C A G A G C T A C T G A C G T A T G C G A T C A G T C 1e-8-2.068e+011.44%0.11%28.0bp (29.3bp)NEUROG2/MA0669.1/Jaspar(0.643)
More Information | Similar Motifs Found		motif file (matrix)
25 * C T A G A C T G C T A G A C G T A G T C C T G A A C T G C T G A A C T G C T A G 1e-8-2.059e+013.93%1.03%25.9bp (30.4bp)NR2C2/MA0504.1/Jaspar(0.796)
More Information | Similar Motifs Found		motif file (matrix)
26 * T A G C A T G C G A T C A C G T A C G T A G C T C T A G T A C G C A T G G C A T C G A T C G A T A C T G A C T G A C G T A G C T 1e-8-2.048e+011.44%0.11%27.5bp (32.8bp)IRF9/MA0653.1/Jaspar(0.597)
More Information | Similar Motifs Found		motif file (matrix)
27 * A C G T A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T 1e-8-1.971e+010.52%0.00%8.6bp (4.5bp)Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer(0.622)
More Information | Similar Motifs Found		motif file (matrix)
28 * A C G T A C T G A C G T A G T C A G T C C G T A C G T A A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C T G A C T G 1e-8-1.971e+010.52%0.00%30.6bp (31.3bp)PB0150.1_Mybl1_2/Jaspar(0.629)
More Information | Similar Motifs Found		motif file (matrix)
29 * C T G A A G T C C G A T C T G A C G T A A T G C A G C T A C G T A C T G C G T A A G T C A G C T A C G T A G C T C G T A A T C G 1e-8-1.971e+010.52%0.00%28.9bp (0.0bp)Nr2e1/MA0676.1/Jaspar(0.681)
More Information | Similar Motifs Found		motif file (matrix)
30 * C G T A C G T A C G T A A G C T C G A T A C T G G C T A A G T C G T C A C G T A A T G C C G T A A C G T 1e-8-1.856e+010.65%0.01%24.7bp (25.2bp)Myb/MA0100.2/Jaspar(0.634)
More Information | Similar Motifs Found		motif file (matrix)
31 * C G T A A C G T A C T G C T G A A G T C A G T C C G T A C T A G A T C G T C G A C T G A A T G C A G C T A C G T A C G T A C T G 1e-7-1.831e+010.79%0.02%20.9bp (19.5bp)SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer(0.624)
More Information | Similar Motifs Found		motif file (matrix)
32 * A G T C A G T C G T A C G A T C G T A C T A G C T G C A A T G C A T G C A C G T A T C G T C G A G T A C T A G C A G C T G A T C 1e-7-1.684e+011.31%0.12%23.1bp (25.5bp)PB0057.1_Rxra_1/Jaspar(0.659)
More Information | Similar Motifs Found		motif file (matrix)
33 * A G T C A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G A T G C 1e-6-1.581e+010.65%0.02%16.0bp (25.1bp)USF2/MA0526.1/Jaspar(0.625)
More Information | Similar Motifs Found		motif file (matrix)
34 * A C G T A C G T A G C T A C G T A G T C G T A C C A G T A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T T A G C 1e-6-1.554e+010.92%0.05%25.8bp (32.3bp)PB0061.1_Sox11_1/Jaspar(0.650)
More Information | Similar Motifs Found		motif file (matrix)
35 * A G T C A G T C A G T C A C T G G T C A A G T C A C T G A C T G G T A C A C T G A C T G A C T G T G C A 1e-6-1.534e+010.52%0.01%23.5bp (25.5bp)E2F4/MA0470.1/Jaspar(0.679)
More Information | Similar Motifs Found		motif file (matrix)
36 * A C T G A C T G C G T A A C G T A C T G C G T A C T A G A C G T C G T A C G T A 1e-6-1.460e+010.79%0.04%31.8bp (34.2bp)Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer(0.711)
More Information | Similar Motifs Found		motif file (matrix)
37 * T G C A A G T C G T A C A C G T A C G T A C T G A G T C C T A G G T A C C G T A C G T A A C T G A C T G 1e-6-1.419e+010.39%0.00%18.6bp (0.0bp)CEBPE/MA0837.1/Jaspar(0.708)
More Information | Similar Motifs Found		motif file (matrix)
38 * T A C G C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T 1e-6-1.419e+010.39%0.00%29.1bp (0.0bp)GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.764)
More Information | Similar Motifs Found		motif file (matrix)
39 * A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C 1e-5-1.212e+010.39%0.00%7.8bp (4.2bp)PH0117.1_Nkx3-1/Jaspar(0.633)
More Information | Similar Motifs Found		motif file (matrix)
40 * C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A G T C C G T A C G T A 1e-5-1.212e+010.39%0.00%3.3bp (24.7bp)DMRT3/MA0610.1/Jaspar(0.560)
More Information | Similar Motifs Found		motif file (matrix)
41 * C T A G A G T C C G T A A C G T A C T G C G T A A C G T A T C G C G T A A G T C 1e-4-9.496e+000.65%0.06%28.1bp (30.0bp)MAFG::NFE2L1/MA0089.1/Jaspar(0.712)
More Information | Similar Motifs Found		motif file (matrix)
42 * C G T A A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G A T A G T C C G A T A G T C A C G T A G T C A C G T A G T C 1e-1-4.136e+000.13%0.00%0.0bp (0.0bp)KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer(0.572)
More Information | Similar Motifs Found		motif file (matrix)