Information for 17-TAGGGACATGTGTCCC (Motif 24)

A C G T C G T A A C T G C A T G A C T G C T G A T A G C C G T A G A C T T C A G A G C T A C T G A C G T A T G C G A T C A G T C
Reverse Opposite:
C T A G C T A G A T C G C G T A T G A C C T G A A G T C C T G A C G A T A C T G A G C T A G T C G T A C A G T C G C A T T C G A
p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.676
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif50.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets50.0 +/- 28.0bp
Average Position of motif in Background40.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2/MA0669.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TAGGGACATGTGTCCC
----GACATATGTT--
 A C G T C G T A A C T G C A T G A C T G C T G A T A G C C G T A G A C T T C A G A G C T A C T G A C G T A T G C G A T C A G T C
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TAGGGACATGTGTCCC
----AACACGTGTT--
 A C G T C G T A A C T G C A T G A C T G C T G A T A G C C G T A G A C T T C A G A G C T A C T G A C G T A T G C G A T C A G T C
A C G T A C G T A C G T A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TAGGGACATGTGTCCC
----ACCATATGTT--
 A C G T C G T A A C T G C A T G A C T G C T G A T A G C C G T A G A C T T C A G A G C T A C T G A C G T A T G C G A T C A G T C
A C G T A C G T A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TAGGGACATGTGTCCC--
--CNGACACCTGTTCNNN
 A C G T C G T A A C T G C A T G A C T G C T G A T A G C C G T A G A C T T C A G A G C T A C T G A C G T A T G C G A T C A G T C A C G T A C G T
A C G T A C G T T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.59
Offset:9
Orientation:reverse strand
Alignment:TAGGGACATGTGTCCC---
---------CTGTTCCTGG
 A C G T C G T A A C T G C A T G A C T G C T G A T A G C C G T A G A C T T C A G A G C T A C T G A C G T A T G C G A T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

HEY2/MA0649.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TAGGGACATGTGTCCC
----GACACGTGCC--
 A C G T C G T A A C T G C A T G A C T G C T G A T A G C C G T A G A C T T C A G A G C T A C T G A C G T A T G C G A T C A G T C
A C G T A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TAGGGACATGTGTCCC
----ANCATATGTT--
 A C G T C G T A A C T G C A T G A C T G C T G A T A G C C G T A G A C T T C A G A G C T A C T G A C G T A T G C G A T C A G T C
A C G T A C G T A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGGGACATGTGTCCC-
CCNNACCATCTGGCCTN
 A C G T C G T A A C T G C A T G A C T G C T G A T A G C C G T A G A C T T C A G A G C T A C T G A C G T A T G C G A T C A G T C A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PKNOX2/MA0783.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TAGGGACATGTGTCCC
---TGACAGGTGTCA-
 A C G T C G T A A C T G C A T G A C T G C T G A T A G C C G T A G A C T T C A G A G C T A C T G A C G T A T G C G A T C A G T C
A C G T A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T

HEY1/MA0823.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TAGGGACATGTGTCCC
----GGCACGTGTC--
 A C G T C G T A A C T G C A T G A C T G C T G A T A G C C G T A G A C T T C A G A G C T A C T G A C G T A T G C G A T C A G T C
A C G T A C G T A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T A C G T