Information for 25-ACTCTGGCTACAA (Motif 40)

C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T C G T A A C T G A G T C A G T C C G T A A C T G C G T A A C T G A C G T
p-value:1e-5
log p-value:-1.212e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 3.3bp
Average Position of motif in Background61.5 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACTCTGGCTACAA-
---NTTGATACATT
 C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACTCTGGCTACAA---
-ATTTGCATACAATGG
 C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACTCTGGCTACAA
GGTCTGGCAT---
 C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A G T C C G T A C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACTCTGGCTACAA
ATTCTCGCGAGA-
 C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A G T C C G T A C G T A
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ACTCTGGCTACAA
NNAATTCTCGNTNAN-
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A G T C C G T A C G T A
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACTCTGGCTACAA
-SCCTAGCAACAG
 C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A G T C C G T A C G T A
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0159.1_Rfx4_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ACTCTGGCTACAA-
TACCCTAGTTACCGA
 A C G T C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A G T C C G T A C G T A A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

RFX4/MA0799.1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ACTCTGGCTACAA
CGTTGCCATGGCAACG-
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A G T C C G T A C G T A
A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ACTCTGGCTACAA
---TTGGCA----
 C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A G T C C G T A C G T A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---ACTCTGGCTACAA
GTTGCCATGGCAAC--
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T C G T A A G T C C G T A C G T A
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T