Information for 8-AGTTAAWATTTAA (Motif 6)

C G T A C T A G A C G T A C G T C G T A C G T A C G T A T G C A C G A T C G A T C G A T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A G C T A A C G T C G A T A C G T A C G T C G T A C G T A A G T C A C G T
p-value:1e-14
log p-value:-3.263e+01
Information Content per bp:1.839
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.2 +/- 29.8bp
Average Position of motif in Background41.8 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:AGTTAAWATTTAA
GGTTAAACATTAA
 C G T A C T A G A C G T A C G T C G T A C G T A C G T A T G C A C G A T C G A T C G A T C G T A C G T A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AGTTAAWATTTAA--
NGTTAATNATTAACN
 C G T A C T A G A C G T A C G T C G T A C G T A C G T A T G C A C G A T C G A T C G A T C G T A C G T A A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.81
Offset:1
Orientation:forward strand
Alignment:AGTTAAWATTTAA
-GTTAATNATTAA
 C G T A C T A G A C G T A C G T C G T A C G T A C G T A T G C A C G A T C G A T C G A T C G T A C G T A
A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

HNF1B/MA0153.2/Jaspar

Match Rank:4
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AGTTAAWATTTAA-
-GTTAATGATTAAC
 C G T A C T A G A C G T A C G T C G T A C G T A C G T A T G C A C G A T C G A T C G A T C G T A C G T A A C G T
A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C

PH0172.1_Tlx2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AGTTAAWATTTAA
TAATTAATTAATAACTA-
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C G T C G T A C G T A C G T A T G C A C G A T C G A T C G A T C G T A C G T A
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGTTAAWATTTAA---
TAATTAATTAATAATTA
 A C G T C G T A C T A G A C G T A C G T C G T A C G T A C G T A T G C A C G A T C G A T C G A T C G T A C G T A A C G T A C G T A C G T
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGTTAAWATTTAA
NTAATTAATAT----
 A C G T A C G T C G T A C T A G A C G T A C G T C G T A C G T A C G T A T G C A C G A T C G A T C G A T C G T A C G T A
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGTTAAWATTTAA
ACTAGTTAAC------
 A C G T A C G T A C G T C G T A C T A G A C G T A C G T C G T A C G T A C G T A T G C A C G A T C G A T C G A T C G T A C G T A
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AGTTAAWATTTAA
ANNNCTAGTTAACNGNN--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C G T C G T A C G T A C G T A T G C A C G A T C G A T C G A T C G T A C G T A
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGTTAAWATTTAA--
-ATGAATAATTAATG
 C G T A C T A G A C G T A C G T C G T A C G T A C G T A T G C A C G A T C G A T C G A T C G T A C G T A A C G T A C G T
A C G T T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G