Information for 10-ACCTCATGTTGNA (Motif 8)

G T C A A G T C G T A C A G C T A G T C G T C A A G C T A C T G A C G T C G A T A C T G T G A C T C G A
Reverse Opposite:
A G C T A C T G A G T C C G T A G T C A G T A C C T G A A C G T A C T G T C G A A C T G T C A G A C G T
p-value:1e-13
log p-value:-3.172e+01
Information Content per bp:1.712
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif41.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets44.3 +/- 27.4bp
Average Position of motif in Background54.3 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT1/MA0743.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACCTCATGTTGNA-
ANCCACCTGTTGCNC
 A C G T G T C A A G T C G T A C A G C T A G T C G T C A A G C T A C T G A C G T C G A T A C T G T G A C T C G A A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACCTCATGTTGNA-
-CCACCTGTTGCAT
 G T C A A G T C G T A C A G C T A G T C G T C A A G C T A C T G A C G T C G A T A C T G T G A C T C G A A C G T
A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACCTCATGTTGNA---
-TCNCCTGCTGNGNNN
 G T C A A G T C G T A C A G C T A G T C G T C A A G C T A C T G A C G T C G A T A C T G T G A C T C G A A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACCTCATGTTGNA---
-NNTCCTGCTGTGNNN
 G T C A A G T C G T A C A G C T A G T C G T C A A G C T A C T G A C G T C G A T A C T G T G A C T C G A A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACCTCATGTTGNA
-CCCCCTGCTGTG
 G T C A A G T C G T A C A G C T A G T C G T C A A G C T A C T G A C G T C G A T A C T G T G A C T C G A
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACCTCATGTTGNA---
-TNTCCTGCTGTGNNG
 G T C A A G T C G T A C A G C T A G T C G T C A A G C T A C T G A C G T C G A T A C T G T G A C T C G A A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACCTCATGTTGNA--
TGTTCCCATTGTGTACT
 A C G T A C G T G T C A A G T C G T A C A G C T A G T C G T C A A G C T A C T G A C G T C G A T A C T G T G A C T C G A A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACCTCATGTTGNA
GACCCCCCGCTGTG
 A C G T G T C A A G T C G T A C A G C T A G T C G T C A A G C T A C T G A C G T C G A T A C T G T G A C T C G A
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACCTCATGTTGNA-
GACCCCCCGCTGTGC
 A C G T G T C A A G T C G T A C A G C T A G T C G T C A A G C T A C T G A C G T C G A T A C T G T G A C T C G A A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ACCTCATGTTGNA-
----CCTGCTGAGH
 G T C A A G T C G T A C A G C T A G T C G T C A A G C T A C T G A C G T C G A T A C T G T G A C T C G A A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A