Information for 9-TGATCRGAGTCCA (Motif 7)

C G A T A T C G C T G A A C G T T G A C C T A G C A T G C G T A A C T G A C G T A G T C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A T A G C C G A T G T A C G A T C A C T G T G C A A G C T A T G C C G T A
p-value:1e-13
log p-value:-3.213e+01
Information Content per bp:1.716
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif114.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets42.9 +/- 25.8bp
Average Position of motif in Background50.0 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGATCRGAGTCCA----
-GGCAAAAGTCCAATAA
 C G A T A T C G C T G A A C G T T G A C C T A G C A T G C G T A A C T G A C G T A G T C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGATCRGAGTCCA---
NTNNNAGGAGTCTCNTN
 A C G T C G A T A T C G C T G A A C G T T G A C C T A G C A T G C G T A A C T G A C G T A G T C G T A C C G T A A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGATCRGAGTCCA
TGACAGGTGTCA-
 C G A T A T C G C T G A A C G T T G A C C T A G C A T G C G T A A C T G A C G T A G T C G T A C C G T A
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGATCRGAGTCCA
TGACAGGTGTCA-
 C G A T A T C G C T G A A C G T T G A C C T A G C A T G C G T A A C T G A C G T A G T C G T A C C G T A
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGATCRGAGTCCA--
GGGGTCAAAGTCCAAT
 A C G T C G A T A T C G C T G A A C G T T G A C C T A G C A T G C G T A A C T G A C G T A G T C G T A C C G T A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

TGIF2/MA0797.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGATCRGAGTCCA
TGACAGCTGTCA-
 C G A T A T C G C T G A A C G T T G A C C T A G C A T G C G T A A C T G A C G T A G T C G T A C C G T A
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TGATCRGAGTCCA-
--------ATCCAC
 C G A T A T C G C T G A A C G T T G A C C T A G C A T G C G T A A C T G A C G T A G T C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGATCRGAGTCCA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T C G A T A T C G C T G A A C G T T G A C C T A G C A T G C G T A A C T G A C G T A G T C G T A C C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

TGIF1/MA0796.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGATCRGAGTCCA
TGACAGCTGTCA-
 C G A T A T C G C T G A A C G T T G A C C T A G C A T G C G T A A C T G A C G T A G T C G T A C C G T A
G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGATCRGAGTCCA
----AAAAGTCAA
 C G A T A T C G C T G A A C G T T G A C C T A G C A T G C G T A A C T G A C G T A G T C G T A C C G T A
A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A