Information for 12-GACCTCDCCAGGC (Motif 9)

A C T G G T C A A G T C A G T C C G A T A G T C C A G T A G T C A G T C C G T A C A T G A C T G A G T C
Reverse Opposite:
A C T G A G T C G T A C A C G T A C T G A C T G G A C T A C T G C G T A A C T G A C T G A C G T A G T C
p-value:1e-13
log p-value:-3.138e+01
Information Content per bp:1.867
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 28.2bp
Average Position of motif in Background65.4 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GACCTCDCCAGGC
GCGACCACACTG---
 A C G T A C G T A C T G G T C A A G T C A G T C C G A T A G T C C A G T A G T C A G T C C G T A C A T G A C T G A G T C
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCDCCAGGC
TGACCYCT------
 A C G T A C T G G T C A A G T C A G T C C G A T A G T C C A G T A G T C A G T C C G T A C A T G A C T G A G T C
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GACCTCDCCAGGC--
GACCACGCCCTTATT
 A C T G G T C A A G T C A G T C C G A T A G T C C A G T A G T C A G T C C G T A C A T G A C T G A G T C A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GACCTCDCCAGGC
NNNNTTGACCCCTNNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C A G T C C G A T A G T C C A G T A G T C A G T C C G T A C A T G A C T G A G T C
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCDCCAGGC
TGACCTYA------
 A C G T A C T G G T C A A G T C A G T C C G A T A G T C C A G T A G T C A G T C C G T A C A T G A C T G A G T C
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GACCTCDCCAGGC
TGTCGTGACCCCTTAAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C A G T C C G A T A G T C C A G T A G T C A G T C C G T A C A T G A C T G A G T C
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GACCTCDCCAGGC
-ATCACCCCAT--
 A C T G G T C A A G T C A G T C C G A T A G T C C A G T A G T C A G T C C G T A C A T G A C T G A G T C
A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GACCTCDCCAGGC
-NSCACTYVAV--
 A C T G G T C A A G T C A G T C C G A T A G T C C A G T A G T C A G T C C G T A C A T G A C T G A G T C
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GACCTCDCCAGGC
TGACCT--------
 A C G T A C T G G T C A A G T C A G T C C G A T A G T C C A G T A G T C A G T C C G T A C A T G A C T G A G T C
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GACCTCDCCAGGC
GGCCACACCCA--
 A C T G G T C A A G T C A G T C C G A T A G T C C A G T A G T C A G T C C G T A C A T G A C T G A G T C
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T