Information for 6-CAGAGTGAGGCCA (Motif 4)

A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G C T A G A G T C A G T C C G A T A G T C G T C A A G T C A C G T T A G C A C G T A C T G
p-value:1e-16
log p-value:-3.746e+01
Information Content per bp:1.935
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 27.5bp
Average Position of motif in Background47.4 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAGAGTGAGGCCA
-----TRAGGTCA
 A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGAGTGAGGCCA
NTGGGTGTGGCC-
 A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C C G T A
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAGAGTGAGGCCA-
RGGTCADNNAGAGGTCAV
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C C G T A A C G T
C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGAGTGAGGCCA
-TGGGTGTGGCN-
 A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C C G T A
A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAGAGTGAGGCCA
MKGGGYGTGGCC-
 A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C C G T A
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGAGTGAGGCCA----
-AGAGCGGGGTCAAGTA
 A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

CREB1/MA0018.2/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAGAGTGAGGCCA
-----TGACGTCA
 A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGAGTGAGGCCA-
--NRRTGACGTCAT
 A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGAGTGAGGCCA-
-AAGATGATGTCAT
 A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGAGTGAGGCCA--
AAAGATGATGTCATC
 A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C C G T A A C G T A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C