Information for 19-AAAYWGWCAASAT (Motif 30)

C G T A C G T A C G T A A G C T C G A T A C T G G C T A A G T C G T C A C G T A A T G C C G T A A C G T
Reverse Opposite:
C G T A A C G T A T C G A C G T A C G T A C T G C G A T A G T C C G T A C T G A A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.856e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 24.7bp
Average Position of motif in Background29.8 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAAYWGWCAASAT
CCAACTGCCA----
 A C G T C G T A C G T A C G T A A G C T C G A T A C T G G C T A A G T C G T C A C G T A A T G C C G T A A C G T
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAAYWGWCAASAT
-ARNTGACA----
 C G T A C G T A C G T A A G C T C G A T A C T G G C T A A G T C G T C A C G T A A T G C C G T A A C G T
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAAYWGWCAASAT
--RHTGWCAR---
 C G T A C G T A C G T A A G C T C G A T A C T G G C T A A G T C G T C A C G T A A T G C C G T A A C G T
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAAYWGWCAASAT----
---AAGATAAGATAACA
 C G T A C G T A C G T A A G C T C G A T A C T G G C T A A G T C G T C A C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAAYWGWCAASAT
-AACCGANA----
 C G T A C G T A C G T A A G C T C G A T A C T G G C T A A G T C G T C A C G T A A T G C C G T A A C G T
A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAAYWGWCAASAT-
--TATGTAAACANG
 C G T A C G T A C G T A A G C T C G A T A C T G G C T A A G T C G T C A C G T A A T G C C G T A A C G T A C G T
A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXC1/MA0032.2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAAYWGWCAASAT
--TATGTAAATAT
 C G T A C G T A C G T A A G C T C G A T A C T G G C T A A G T C G T C A C G T A A T G C C G T A A C G T
A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAAYWGWCAASAT--
NCWRWGTAAACANSV
 C G T A C G T A C G T A A G C T C G A T A C T G G C T A A G T C G T C A C G T A A T G C C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAYWGWCAASAT
AAAATTGTTATGAA
 A C G T C G T A C G T A C G T A A G C T C G A T A C T G G C T A A G T C G T C A C G T A A T G C C G T A A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAAYWGWCAASAT
-AAAAGTCAA---
 C G T A C G T A C G T A A G C T C G A T A C T G G C T A A G T C G T C A C G T A A T G C C G T A A C G T
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T