Information for 21-ACTAACTTGACTTTAG (Motif 29)

C T G A A G T C C G A T C T G A C G T A A T G C A G C T A C G T A C T G C G T A A G T C A G C T A C G T A G C T C G T A A T C G
Reverse Opposite:
A T G C A C G T C T G A C G T A C T G A A C T G C G A T G T A C C G T A C T G A A T C G G C A T G A C T C G T A A C T G A G C T
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.899
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 28.9bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:ACTAACTTGACTTTAG
------TTGACTTTT-
 C T G A A G T C C G A T C T G A C G T A A T G C A G C T A C G T A C T G C G T A A G T C A G C T A C G T A G C T C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACTAACTTGACTTTAG--
--NNATTGGACTTTNGNN
 C T G A A G T C C G A T C T G A C G T A A T G C A G C T A C G T A C T G C G T A A G T C A G C T A C G T A G C T C G T A A T C G A C G T A C G T
A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACTAACTTGACTTTAG
TAAGCCACTTGAAATT--
 A C G T A C G T C T G A A G T C C G A T C T G A C G T A A T G C A G C T A C G T A C T G C G T A A G T C A G C T A C G T A G C T C G T A A T C G
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ACTAACTTGACTTTAG
--NNACTTGCCTT---
 C T G A A G T C C G A T C T G A C G T A A T G C A G C T A C G T A C T G C G T A A G T C A G C T A C G T A G C T C G T A A T C G
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ACTAACTTGACTTTAG---
---NNNNTGACCTTTNNNN
 C T G A A G T C C G A T C T G A C G T A A T G C A G C T A C G T A C T G C G T A A G T C A G C T A C G T A G C T C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:ACTAACTTGACTTTAG
------GTGACCTT--
 C T G A A G T C C G A T C T G A C G T A A T G C A G C T A C G T A C T G C G T A A G T C A G C T A C G T A G C T C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:ACTAACTTGACTTTAG
-------TGACCTYA-
 C T G A A G T C C G A T C T G A C G T A A T G C A G C T A C G T A C T G C G T A A G T C A G C T A C G T A G C T C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:ACTAACTTGACTTTAG
------CTGACCTTTG
 C T G A A G T C C G A T C T G A C G T A A T G C A G C T A C G T A C T G C G T A A G T C A G C T A C G T A G C T C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ACTAACTTGACTTTAG---
---NNNGTGACCTTTGNNN
 C T G A A G T C C G A T C T G A C G T A A T G C A G C T A C G T A C T G C G T A A G T C A G C T A C G T A G C T C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:ACTAACTTGACTTTAG
------NTGACCTTGA
 C T G A A G T C C G A T C T G A C G T A A T G C A G C T A C G T A C T G C G T A A G T C A G C T A C G T A G C T C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A