Information for 11-TGCATCTACT (Motif 27)

A C G T A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 8.6bp
Average Position of motif in Background62.2 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGCATCTACT
ATGMATATDC-
 A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGCATCTACT
ATTTGCATAT---
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGCATCTACT---
AATATACATGTAATATA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TGCATCTACT
TTCATTTGCATAT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGCATCTACT
GGGATTGCATNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGCATCTACT---
AAAATACATGTAATACT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

DMRT3/MA0610.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGCATCTACT
AATGTATCAAT-
 A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGCATCTACT--
ANTTNTACATGTANTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGCATCTACT
ATTGCATCAK--
 A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGCATCTACT--
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A