Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-320 | -7.379e+02 | 0.0000 | 335.0 | 43.85% | 1144.5 | 2.41% | motif file (matrix) |
svg |
2 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-144 | -3.316e+02 | 0.0000 | 392.0 | 51.31% | 6056.1 | 12.77% | motif file (matrix) |
svg |
3 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-86 | -1.983e+02 | 0.0000 | 209.0 | 27.36% | 2525.6 | 5.33% | motif file (matrix) |
svg |
4 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-80 | -1.865e+02 | 0.0000 | 220.0 | 28.80% | 3016.5 | 6.36% | motif file (matrix) |
svg |
5 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-55 | -1.267e+02 | 0.0000 | 69.0 | 9.03% | 292.0 | 0.62% | motif file (matrix) |
svg |
6 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-49 | -1.142e+02 | 0.0000 | 384.0 | 50.26% | 11905.7 | 25.11% | motif file (matrix) |
svg |
7 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-37 | -8.737e+01 | 0.0000 | 203.0 | 26.57% | 4739.2 | 9.99% | motif file (matrix) |
svg |
8 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-37 | -8.546e+01 | 0.0000 | 113.0 | 14.79% | 1648.6 | 3.48% | motif file (matrix) |
svg |
9 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-31 | -7.361e+01 | 0.0000 | 55.0 | 7.20% | 401.8 | 0.85% | motif file (matrix) |
svg |
10 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-26 | -6.072e+01 | 0.0000 | 112.0 | 14.66% | 2163.9 | 4.56% | motif file (matrix) |
svg |
11 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-23 | -5.449e+01 | 0.0000 | 97.0 | 12.70% | 1818.2 | 3.83% | motif file (matrix) |
svg |
12 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-23 | -5.419e+01 | 0.0000 | 93.0 | 12.17% | 1693.4 | 3.57% | motif file (matrix) |
svg |
13 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-22 | -5.101e+01 | 0.0000 | 95.0 | 12.43% | 1842.9 | 3.89% | motif file (matrix) |
svg |
14 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-21 | -4.968e+01 | 0.0000 | 87.0 | 11.39% | 1608.9 | 3.39% | motif file (matrix) |
svg |
15 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-18 | -4.358e+01 | 0.0000 | 75.0 | 9.82% | 1367.5 | 2.88% | motif file (matrix) |
svg |
16 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-16 | -3.820e+01 | 0.0000 | 44.0 | 5.76% | 559.8 | 1.18% | motif file (matrix) |
svg |
17 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-16 | -3.808e+01 | 0.0000 | 34.0 | 4.45% | 323.8 | 0.68% | motif file (matrix) |
svg |
18 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-16 | -3.773e+01 | 0.0000 | 42.0 | 5.50% | 515.9 | 1.09% | motif file (matrix) |
svg |
19 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-15 | -3.609e+01 | 0.0000 | 90.0 | 11.78% | 2125.8 | 4.48% | motif file (matrix) |
svg |
20 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-13 | -3.117e+01 | 0.0000 | 52.0 | 6.81% | 930.8 | 1.96% | motif file (matrix) |
svg |
21 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-12 | -2.863e+01 | 0.0000 | 75.0 | 9.82% | 1826.9 | 3.85% | motif file (matrix) |
svg |
22 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-12 | -2.765e+01 | 0.0000 | 59.0 | 7.72% | 1265.8 | 2.67% | motif file (matrix) |
svg |
23 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-11 | -2.628e+01 | 0.0000 | 58.0 | 7.59% | 1273.7 | 2.69% | motif file (matrix) |
svg |
24 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-11 | -2.594e+01 | 0.0000 | 15.0 | 1.96% | 77.2 | 0.16% | motif file (matrix) |
svg |
25 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-10 | -2.447e+01 | 0.0000 | 57.0 | 7.46% | 1297.7 | 2.74% | motif file (matrix) |
svg |
26 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-10 | -2.355e+01 | 0.0000 | 55.0 | 7.20% | 1255.4 | 2.65% | motif file (matrix) |
svg |
27 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-10 | -2.305e+01 | 0.0000 | 18.0 | 2.36% | 149.7 | 0.32% | motif file (matrix) |
svg |
28 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-9 | -2.155e+01 | 0.0000 | 37.0 | 4.84% | 687.8 | 1.45% | motif file (matrix) |
svg |
29 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-8 | -2.044e+01 | 0.0000 | 52.0 | 6.81% | 1255.1 | 2.65% | motif file (matrix) |
svg |
30 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-8 | -1.970e+01 | 0.0000 | 51.0 | 6.68% | 1245.3 | 2.63% | motif file (matrix) |
svg |
31 |
| Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer | 1e-7 | -1.795e+01 | 0.0000 | 14.0 | 1.83% | 119.7 | 0.25% | motif file (matrix) |
svg |
32 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.549e+01 | 0.0000 | 39.0 | 5.10% | 948.8 | 2.00% | motif file (matrix) |
svg |
33 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-6 | -1.499e+01 | 0.0000 | 47.0 | 6.15% | 1285.2 | 2.71% | motif file (matrix) |
svg |
34 |
| HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer | 1e-6 | -1.486e+01 | 0.0000 | 13.0 | 1.70% | 132.0 | 0.28% | motif file (matrix) |
svg |
35 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.485e+01 | 0.0000 | 41.0 | 5.37% | 1051.6 | 2.22% | motif file (matrix) |
svg |
36 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-6 | -1.383e+01 | 0.0000 | 39.0 | 5.10% | 1015.2 | 2.14% | motif file (matrix) |
svg |
37 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-5 | -1.271e+01 | 0.0000 | 20.0 | 2.62% | 362.5 | 0.76% | motif file (matrix) |
svg |
38 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-5 | -1.220e+01 | 0.0000 | 48.0 | 6.28% | 1470.6 | 3.10% | motif file (matrix) |
svg |
39 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-4 | -1.122e+01 | 0.0001 | 50.0 | 6.54% | 1617.9 | 3.41% | motif file (matrix) |
svg |
40 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-4 | -1.021e+01 | 0.0003 | 14.0 | 1.83% | 233.2 | 0.49% | motif file (matrix) |
svg |
41 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-4 | -9.743e+00 | 0.0005 | 106.0 | 13.87% | 4502.9 | 9.50% | motif file (matrix) |
svg |
42 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -8.459e+00 | 0.0018 | 53.0 | 6.94% | 1955.1 | 4.12% | motif file (matrix) |
svg |
43 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -8.453e+00 | 0.0018 | 55.0 | 7.20% | 2052.1 | 4.33% | motif file (matrix) |
svg |
44 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-3 | -8.188e+00 | 0.0023 | 16.0 | 2.09% | 354.9 | 0.75% | motif file (matrix) |
svg |
45 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -8.032e+00 | 0.0026 | 61.0 | 7.98% | 2384.8 | 5.03% | motif file (matrix) |
svg |
46 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-3 | -8.028e+00 | 0.0026 | 17.0 | 2.23% | 396.4 | 0.84% | motif file (matrix) |
svg |
47 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.805e+00 | 0.0032 | 92.0 | 12.04% | 4000.2 | 8.44% | motif file (matrix) |
svg |
48 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.077e+00 | 0.0064 | 49.0 | 6.41% | 1880.2 | 3.97% | motif file (matrix) |
svg |
49 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-3 | -7.014e+00 | 0.0067 | 19.0 | 2.49% | 514.5 | 1.08% | motif file (matrix) |
svg |
50 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -6.911e+00 | 0.0073 | 39.0 | 5.10% | 1411.1 | 2.98% | motif file (matrix) |
svg |
51 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.626e+00 | 0.0095 | 58.0 | 7.59% | 2374.9 | 5.01% | motif file (matrix) |
svg |
52 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -5.868e+00 | 0.0198 | 53.0 | 6.94% | 2201.8 | 4.64% | motif file (matrix) |
svg |
53 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.750e+00 | 0.0219 | 27.0 | 3.53% | 935.1 | 1.97% | motif file (matrix) |
svg |
54 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.618e+00 | 0.0245 | 49.0 | 6.41% | 2024.7 | 4.27% | motif file (matrix) |
svg |
55 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.519e+00 | 0.0265 | 39.0 | 5.10% | 1531.3 | 3.23% | motif file (matrix) |
svg |
56 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.454e+00 | 0.0278 | 205.0 | 26.83% | 10771.5 | 22.72% | motif file (matrix) |
svg |
57 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.132e+00 | 0.0377 | 40.0 | 5.24% | 1619.3 | 3.41% | motif file (matrix) |
svg |
58 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.131e+00 | 0.0377 | 33.0 | 4.32% | 1271.4 | 2.68% | motif file (matrix) |
svg |
59 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -5.110e+00 | 0.0377 | 85.0 | 11.13% | 4004.5 | 8.44% | motif file (matrix) |
svg |
60 |
| Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -4.895e+00 | 0.0454 | 12.0 | 1.57% | 325.5 | 0.69% | motif file (matrix) |
svg |
61 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -4.889e+00 | 0.0454 | 21.0 | 2.75% | 718.9 | 1.52% | motif file (matrix) |
svg |
62 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -4.742e+00 | 0.0512 | 89.0 | 11.65% | 4286.4 | 9.04% | motif file (matrix) |
svg |