Information for 14-GTTTAAGAAC (Motif 39)

A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G T C A C G T A C G T C G T A C G T A C G T A A G T C
p-value:1e-5
log p-value:-1.212e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.3 +/- 7.8bp
Average Position of motif in Background25.4 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTTTAAGAAC------
NATTTAAGTACTTANNA
 A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTTTAAGAAC
ANCGTTTANN---
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTTTAAGAAC
ANTTTTACGACC
 A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

PH0067.1_Hoxc12/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTTTAAGAAC---
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTTTAAGAAC
NTTTTACGACC
 A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTTTAAGAAC
NTTTTACGACC
 A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTTTAAGAAC------
NATTTAAGTACTTNAAA
 A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

HOXD12/MA0873.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTTTAAGAAC
NTTTTACGACT
 A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

PH0077.1_Hoxd12/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTTTAAGAAC---
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0112.1_Nkx2-3/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTTTAAGAAC------
CTTTAAGTACTTAATG
 A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G