Homer de novo Motif Results (hs_epidermis_keratinocytes_normal_P63_SRX019786_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 724
Total background sequences = 45420
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G C T A G C T A G A G T C G C T A C G A T A C T G G A C T G A T C A G T C T G C A C T A G C T G A A G T C G C T A C A G T 1e-259-5.980e+0251.66%5.64%18.7bp (34.3bp)p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer(0.893)
More Information | Similar Motifs Found
motif file (matrix)
2 T C G A A C G T A C T G G C T A T A G C A C G T A G T C C G T A A G C T A C G T G T C A G C T A A T C G 1e-49-1.131e+0217.96%3.71%27.4bp (32.3bp)Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer(0.969)
More Information | Similar Motifs Found
motif file (matrix)
3 T A C G G C T A A T G C T C G A A C G T A T C G T G A C G T A C C G A T A T C G 1e-30-6.991e+0151.10%30.44%27.3bp (34.7bp)SD0002.1_at_AC_acceptor/Jaspar(0.745)
More Information | Similar Motifs Found
motif file (matrix)
4 T A G C C T A G C G A T T C G A T A G C A C G T A G C T T C A G G C A T A T G C G C A T C G T A C T A G 1e-21-5.056e+0116.57%6.16%24.8bp (32.2bp)Hes2/MA0616.1/Jaspar(0.734)
More Information | Similar Motifs Found
motif file (matrix)
5 T A G C G C T A T A C G C A T G A C T G T A G C A G C T C A T G C A T G C T A G T A G C G T C A A T C G 1e-20-4.626e+0110.36%2.91%22.1bp (32.2bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.725)
More Information | Similar Motifs Found
motif file (matrix)
6 C A G T A C G T A G C T G A T C C G A T C T A G C T A G T C A G T G A C G C T A 1e-17-4.055e+018.01%2.02%28.1bp (34.6bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.841)
More Information | Similar Motifs Found
motif file (matrix)
7 T A G C G T C A G C T A T C A G C G A T T A G C C G A T C T A G G A C T C T G A 1e-15-3.632e+019.39%2.95%25.3bp (34.3bp)SD0002.1_at_AC_acceptor/Jaspar(0.580)
More Information | Similar Motifs Found
motif file (matrix)
8 A T C G A T G C C A G T A C G T A C T G C A G T G T A C C G T A T C A G A T C G 1e-13-3.177e+0110.22%3.74%29.9bp (32.7bp)Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer(0.682)
More Information | Similar Motifs Found
motif file (matrix)
9 C T G A A C T G A G T C A G C T A C G T A G C T T C G A C T G A T G C A A T C G C G T A C G T A A C T G C G A T A C T G A T C G 1e-13-3.145e+010.83%0.00%17.4bp (2.3bp)Stat4/MA0518.1/Jaspar(0.554)
More Information | Similar Motifs Found
motif file (matrix)
10 C T A G A T G C A T G C A T G C A G T C G A C T A G T C A G T C G A T C A T C G A G C T G A C T C A G T A G T C A C G T G T A C 1e-13-3.095e+011.10%0.01%24.2bp (12.4bp)SP1/MA0079.3/Jaspar(0.599)
More Information | Similar Motifs Found
motif file (matrix)
11 A T G C T C A G C G A T A C T G C T G A C T A G C T A G T C G A A T G C C G T A A C T G A C T G A G T C G A C T A G T C G C A T 1e-13-3.095e+011.10%0.01%17.1bp (22.9bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.623)
More Information | Similar Motifs Found
motif file (matrix)
12 C T G A T A C G G C T A T G A C C T G A G A C T A C T G G C A T A C G T A G T C 1e-13-3.045e+019.81%3.59%29.8bp (34.3bp)PB0060.1_Smad3_1/Jaspar(0.642)
More Information | Similar Motifs Found
motif file (matrix)
13 A C T G C T A G C T A G A C G T A T C G A C G T A C T G C A T G G C A T A G C T 1e-13-3.019e+013.04%0.36%23.1bp (28.7bp)EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer(0.877)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C G T A C T G C T A G C G A T A T C G A T G C T C G A C T G A A C T G G T C A A C G T A C T G C G T A A C T G C G T A A G T C 1e-11-2.730e+010.83%0.01%24.4bp (11.4bp)ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer(0.646)
More Information | Similar Motifs Found
motif file (matrix)
15 * G A T C C G T A A C T G A G T C C G T A C A T G T C A G A G T C G T A C C G A T A C T G T A G C G A C T 1e-11-2.638e+011.93%0.14%32.3bp (33.3bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.672)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C T G A G T C C G T A C T A G G T C A C G T A A G C T C G T A C G T A C G T A A C T G C G T A C G T A 1e-11-2.551e+010.69%0.00%31.0bp (0.0bp)PB0061.1_Sox11_1/Jaspar(0.685)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A A G T C A C G T A C G T A G C T A T G C C G T A C G T A C G T A C G T A C G T A A C G T A C T G 1e-11-2.551e+010.69%0.00%31.5bp (5.2bp)PB0145.1_Mafb_2/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
18 * G C T A A C T G C T A G A G T C A T G C A C G T A C G T G A T C C G T A C A G T G T C A G T A C C G T A A G T C A G T C A C G T 1e-11-2.551e+010.69%0.00%30.3bp (0.0bp)LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer(0.589)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G C T A T C G G C T A A T G C C G T A A T C G A C T G A C G T A T G C C T G A A C T G A C T G T A C G G T A C A C T G A T C G 1e-11-2.551e+010.69%0.00%19.0bp (13.2bp)PH0140.1_Pknox1/Jaspar(0.636)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G A G C T A G T C C G A T A C G T A G T C A G C T A G T C A C G T A T C G G T C A A C T G A G C T A C T G A T C G A G C T 1e-11-2.551e+010.69%0.00%26.1bp (0.0bp)Gata4/MA0482.1/Jaspar(0.517)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C G T C A G T A C T G A C G T A C G T A G T C A C G T A C T G A G T C G A T C C G A T A C T G A T G C G C T A G C T A C G A T 1e-11-2.551e+010.69%0.00%25.0bp (0.0bp)PB0060.1_Smad3_1/Jaspar(0.577)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C T G C T A G A G C T A C G T T C A G A C T G G T A C C G T A G C T A A C T G T A C G A C G T A C T G A G T C T C G A C T A G 1e-11-2.551e+010.69%0.00%28.2bp (0.0bp)NFIC::TLX1/MA0119.1/Jaspar(0.619)
More Information | Similar Motifs Found
motif file (matrix)
23 * G T C A C G T A C G T A A T G C G T C A A C T G C A G T C G T A C G T A A T G C A C G T A C T G T C A G C T G A A G T C G T C A 1e-11-2.551e+010.69%0.00%25.3bp (0.0bp)IRF8/MA0652.1/Jaspar(0.665)
More Information | Similar Motifs Found
motif file (matrix)
24 * A G T C G T C A A C G T A C T G C G T A C G T A A C T G T C G A C T G A A C T G G T A C C G T A A C G T 1e-11-2.547e+011.10%0.02%25.8bp (31.8bp)Gabpa/MA0062.2/Jaspar(0.643)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G T C A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T A C G T 1e-10-2.488e+010.83%0.01%28.8bp (20.2bp)PB0121.1_Foxj3_2/Jaspar(0.671)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C G T A T C G T A G C A G T C A C G T A C G T C G T A A C T G A T C G A G T C C G A T A C G T A C G T 1e-10-2.488e+010.83%0.01%23.0bp (22.6bp)TFAP2C(var.2)/MA0814.1/Jaspar(0.642)
More Information | Similar Motifs Found
motif file (matrix)
27 * C G A T A C T G A G C T A C G T A C G T G C A T C G T A C G A T G A C T C G T A C T G A A C T G A C T G C A T G C G T A A C T G 1e-10-2.488e+010.83%0.01%20.4bp (13.7bp)HOXD13/MA0909.1/Jaspar(0.619)
More Information | Similar Motifs Found
motif file (matrix)
28 * G T A C A C G T A C T G C T A G C T G A C G T A C A G T C T A G A C G T A C T G C T A G C T G A A C G T 1e-10-2.452e+011.80%0.13%26.2bp (29.6bp)TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer(0.667)
More Information | Similar Motifs Found
motif file (matrix)
29 * T C G A C G T A T A G C C G T A A C T G C G T A C G T A A C G T A T C G G T A C A C G T C G T A C G T A A G T C A G T C C T G A 1e-10-2.342e+011.10%0.03%29.0bp (24.6bp)Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer(0.544)
More Information | Similar Motifs Found
motif file (matrix)
30 * A C G T A T G C C G T A C G A T G T C A A C G T A T G C C G T A A C T G A C G T A C G T G T C A C G A T 1e-9-2.206e+010.69%0.00%28.2bp (13.9bp)PB0022.1_Gata5_1/Jaspar(0.632)
More Information | Similar Motifs Found
motif file (matrix)
31 * A C T G A C T G A G T C A C G T A C T G A C T G A C T G C G A T A G T C C G T A G T C A A G T C A G T C 1e-9-2.206e+010.69%0.01%22.6bp (20.6bp)PB0157.1_Rara_2/Jaspar(0.619)
More Information | Similar Motifs Found
motif file (matrix)
32 * A C T G C T G A C G T A C G T A A C G T A C G T G T A C A C G T A G C T A C G T A C T G A G C T G T A C 1e-9-2.206e+010.69%0.01%12.4bp (15.7bp)PB0166.1_Sox12_2/Jaspar(0.650)
More Information | Similar Motifs Found
motif file (matrix)
33 * A G T C C G T A C G T A A G T C C G T A A G T C G C T A C T G A A C G T G T C A G T C A C T A G C G T A A C T G G T A C C T A G 1e-9-2.206e+010.69%0.00%26.6bp (17.4bp)TATA-Box(TBP)/Promoter/Homer(0.552)
More Information | Similar Motifs Found
motif file (matrix)
34 * A C G T T G A C C G T A A C G T A T C G C G A T A C T G A T G C C G T A A C T G 1e-9-2.185e+016.22%2.12%28.3bp (38.3bp)Myc/MA0147.2/Jaspar(0.669)
More Information | Similar Motifs Found
motif file (matrix)
35 * A G T C A G C T A C G T A C T G A G T C G T A C G T A C A T C G C T A G C G A T A T G C G T C A C G T A A C T G A G T C C G T A 1e-9-2.076e+010.83%0.01%25.1bp (34.5bp)p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer(0.659)
More Information | Similar Motifs Found
motif file (matrix)
36 * G T A C G T C A A T C G A C G T C T G A A C G T A C G T A C T G C G T A A T G C 1e-8-2.066e+011.80%0.18%30.0bp (35.8bp)Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer(0.667)
More Information | Similar Motifs Found
motif file (matrix)
37 * C G T A A C T G A C G T C G T A C G T A C G T A A T G C A G T C G T A C G T A C A G T C A C G T T A C G 1e-8-1.975e+010.55%0.00%8.8bp (6.2bp)PH0121.1_Obox1/Jaspar(0.636)
More Information | Similar Motifs Found
motif file (matrix)
38 * A G C T T C A G T A G C T C G A C G A T A T C G A G T C G T C A A T G C C G T A 1e-8-1.909e+014.28%1.24%23.6bp (39.4bp)PB0104.1_Zscan4_1/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
39 * C G T A T C A G A C G T G T A C G T C A C T A G A T C G C A G T C T A G T C G A T G A C A C G T G T A C C G T A A C T G C T A G 1e-7-1.813e+011.24%0.08%25.1bp (27.3bp)FOSL1/MA0477.1/Jaspar(0.652)
More Information | Similar Motifs Found
motif file (matrix)
40 * C G T A A C T G C T A G A C T G G T A C A C G T C T G A A C T G A G C T C A G T C T A G C T G A T G C A 1e-7-1.805e+011.10%0.06%27.2bp (29.6bp)ESR2/MA0258.2/Jaspar(0.600)
More Information | Similar Motifs Found
motif file (matrix)
41 * G T C A G A T C C T A G T C A G C G T A A C T G A G T C C G A T A T G C A G T C 1e-7-1.722e+011.10%0.06%31.8bp (24.8bp)POL013.1_MED-1/Jaspar(0.781)
More Information | Similar Motifs Found
motif file (matrix)
42 * C A T G A C G T C T A G G T C A A C G T A T G C C G T A A T C G C G T A T G A C 1e-7-1.695e+011.80%0.24%19.7bp (32.9bp)PH0016.1_Cux1_1/Jaspar(0.661)
More Information | Similar Motifs Found
motif file (matrix)
43 * C G T A A C G T C G T A C G T A A C T G C G T A A C G T A C G T A C T G A G T C 1e-5-1.216e+010.41%0.01%17.9bp (1.6bp)Arid5a/MA0602.1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
44 * C T G A C G T A T C A G C T G A C T G A A T C G G C A T G C T A C G T A C G A T 1e-4-9.397e+005.25%2.66%26.5bp (30.2bp)POL008.1_DCE_S_I/Jaspar(0.709)
More Information | Similar Motifs Found
motif file (matrix)