Information for 8-GCTTGTCAGG (Motif 8)

A T C G A T G C C A G T A C G T A C T G C A G T G T A C C G T A T C A G A T C G
Reverse Opposite:
T A G C A G T C C G A T C A T G G T C A T G A C T G C A G T C A T A C G T A G C
p-value:1e-13
log p-value:-3.177e+01
Information Content per bp:1.673
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif10.22%
Number of Background Sequences with motif1696.3
Percentage of Background Sequences with motif3.74%
Average Position of motif in Targets49.6 +/- 29.9bp
Average Position of motif in Background49.1 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCTTGTCAGG-
-VBTGWCAGCB
 A T C G A T G C C A G T A C G T A C T G C A G T G T A C C G T A T C A G A T C G A C G T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GCTTGTCAGG
--NTGTCAN-
 A T C G A T G C C A G T A C G T A C T G C A G T G T A C C G T A T C A G A T C G
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCTTGTCAGG--
GGGGCTYGKCTGGGA
 A C G T A C G T A C G T A T C G A T G C C A G T A C G T A C T G C A G T G T A C C G T A T C A G A T C G A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCTTGTCAGG
--TTGACAGC
 A T C G A T G C C A G T A C G T A C T G C A G T G T A C C G T A T C A G A T C G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCTTGTCAGG
--YTGWCADY
 A T C G A T G C C A G T A C G T A C T G C A G T G T A C C G T A T C A G A T C G
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCTTGTCAGG---
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T A T C G A T G C C A G T A C G T A C T G C A G T G T A C C G T A T C A G A T C G A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCTTGTCAGG-
---TGTCANYT
 A T C G A T G C C A G T A C G T A C T G C A G T G T A C C G T A T C A G A T C G A C G T
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCTTGTCAGG
-CTTGGCAA-
 A T C G A T G C C A G T A C G T A C T G C A G T G T A C C G T A T C A G A T C G
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCTTGTCAGG-
---AGTCACGC
 A T C G A T G C C A G T A C G T A C T G C A G T G T A C C G T A T C A G A T C G A C G T
A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGTCAGG-----
GGATTGACAGGTCNTT
 A C G T A T C G A T G C C A G T A C G T A C T G C A G T G T A C C G T A T C A G A T C G A C G T A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T