Information for 9-CAGCAGGCCTGCT (Motif 15)

G A T C C G T A A C T G A G T C C G T A C A T G T C A G A G T C G T A C C G A T A C T G T A G C G A C T
Reverse Opposite:
C T G A A T C G A G T C C G T A C A T G T C A G A G T C G A T C C G A T C T A G A G T C G C A T C T A G
p-value:1e-11
log p-value:-2.638e+01
Information Content per bp:1.770
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif62.5
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets51.2 +/- 32.3bp
Average Position of motif in Background50.9 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CAGCAGGCCTGCT
----AGGCCTNG-
 G A T C C G T A A C T G A G T C C G T A C A T G T C A G A G T C G T A C C G A T A C T G T A G C G A C T
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGCCTGCT
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T G A T C C G T A A C T G A G T C C G T A C A T G T C A G A G T C G T A C C G A T A C T G T A G C G A C T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGGCCTGCT
DCTCAGCAGG------
 A C G T A C G T A C G T G A T C C G T A A C T G A G T C C G T A C A T G T C A G A G T C G T A C C G A T A C T G T A G C G A C T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGCCTGCT
GAGCACAGCAGGACA---
 A C G T A C G T A C G T A C G T A C G T G A T C C G T A A C T G A G T C C G T A C A T G T C A G A G T C G T A C C G A T A C T G T A G C G A C T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAGCAGGCCTGCT
----AGGCCTAG-
 G A T C C G T A A C T G A G T C C G T A C A T G T C A G A G T C G T A C C G A T A C T G T A G C G A C T
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGCCTGCT
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T G A T C C G T A A C T G A G T C C G T A C A T G T C A G A G T C G T A C C G A T A C T G T A G C G A C T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGGCCTGCT
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T G A T C C G T A A C T G A G T C C G T A C A T G T C A G A G T C G T A C C G A T A C T G T A G C G A C T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGGCCTGCT
CACAGCAGGGGG---
 A C G T A C G T G A T C C G T A A C T G A G T C C G T A C A T G T C A G A G T C G T A C C G A T A C T G T A G C G A C T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CAGCAGGCCTGCT
CAGCTGNT-----
 G A T C C G T A A C T G A G T C C G T A C A T G T C A G A G T C G T A C C G A T A C T G T A G C G A C T
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGCAGGCCTGCT----
---CAGGCCNNGGCCNN
 G A T C C G T A A C T G A G T C C G T A C A T G T C A G A G T C G T A C C G A T A C T G T A G C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C