Information for 16-AACAGAATSCTAACCA (Motif 29)

T C G A C G T A T A G C C G T A A C T G C G T A C G T A A C G T A T C G G T A C A C G T C G T A C G T A A G T C A G T C C T G A
Reverse Opposite:
A G C T C T A G C T A G C G A T C G A T T C G A C A T G A T G C G T C A G C A T C G A T G T A C A C G T A C T G G C A T A C G T
p-value:1e-10
log p-value:-2.342e+01
Information Content per bp:1.708
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.3 +/- 29.0bp
Average Position of motif in Background41.2 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AACAGAATSCTAACCA-
-----WATGCAAATGAG
 T C G A C G T A T A G C C G T A A C T G C G T A C G T A A C G T A T C G G T A C A C G T C G T A C G T A A G T C A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AACAGAATSCTAACCA-
-----TATGCWAATBAV
 T C G A C G T A T A G C C G T A A C T G C G T A C G T A A C G T A T C G G T A C A C G T C G T A C G T A A G T C A G T C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU1F1/MA0784.1/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AACAGAATSCTAACCA-
---AATATGCAAATTAG
 T C G A C G T A T A G C C G T A A C T G C G T A C G T A A C G T A T C G G T A C A C G T C G T A C G T A A G T C A G T C C T G A A C G T
A C G T A C G T A C G T C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AACAGAATSCTAACCA---
---ACTATGCCAACCTACC
 T C G A C G T A T A G C C G T A A C T G C G T A C G T A A C G T A T C G G T A C A C G T C G T A C G T A A G T C A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

PH0017.1_Cux1_2/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:AACAGAATSCTAACCA---
----TAATGATGATCACTA
 T C G A C G T A T A G C C G T A A C T G C G T A C G T A A C G T A T C G G T A C A C G T C G T A C G T A A G T C A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AACAGAATSCTAACCA
------ATGCCAACC-
 T C G A C G T A T A G C C G T A A C T G C G T A C G T A A C G T A T C G G T A C A C G T C G T A C G T A A G T C A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AACAGAATSCTAACCA
---ATTATGCTAATTT
 T C G A C G T A T A G C C G T A A C T G C G T A C G T A A C G T A T C G G T A C A C G T C G T A C G T A A G T C A G T C C T G A
A C G T A C G T A C G T C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AACAGAATSCTAACCA
-TAAAAATGCTGACTT
 T C G A C G T A T A G C C G T A A C T G C G T A C G T A A C G T A T C G G T A C A C G T C G T A C G T A A G T C A G T C C T G A
A C G T C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AACAGAATSCTAACCA--
--TTGTATGCAAATTAGA
 T C G A C G T A T A G C C G T A A C T G C G T A C G T A A C G T A T C G G T A C A C G T C G T A C G T A A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:AACAGAATSCTAACCA--
--TTGTATGCAAATTAGA
 T C G A C G T A T A G C C G T A A C T G C G T A C G T A A C G T A T C G G T A C A C G T C G T A C G T A A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A