Information for 3-GACATGCCTG (Motif 3)

T A C G G C T A A T G C T C G A A C G T A T C G T G A C G T A C C G A T A T C G
Reverse Opposite:
T A G C G C T A A C T G A C T G T A G C T G C A A G C T T A C G C G A T A T G C
p-value:1e-30
log p-value:-6.991e+01
Information Content per bp:1.535
Number of Target Sequences with motif370.0
Percentage of Target Sequences with motif51.10%
Number of Background Sequences with motif13823.7
Percentage of Background Sequences with motif30.44%
Average Position of motif in Targets50.5 +/- 27.3bp
Average Position of motif in Background50.6 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GACATGCCTG
NNACTTGCCTT
 A C G T T A C G G C T A A T G C T C G A A C G T A T C G T G A C G T A C C G A T A T C G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GACATGCCTG-
-RCATTCCWGG
 T A C G G C T A A T G C T C G A A C G T A T C G T G A C G T A C C G A T A T C G A C G T
A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GACATGCCTG-
-RCATTCCWGG
 T A C G G C T A A T G C T C G A A C G T A T C G T G A C G T A C C G A T A T C G A C G T
A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

TEAD3/MA0808.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GACATGCCTG
-ACATTCCA-
 T A C G G C T A A T G C T C G A A C G T A T C G T G A C G T A C C G A T A T C G
A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GACATGCCTG--
NNGGCCACGCCTTTN
 A C G T A C G T A C G T T A C G G C T A A T G C T C G A A C G T A T C G T G A C G T A C C G A T A T C G A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GACATGCCTG-----
GTCATGCHTGRCTGS
 T A C G G C T A A T G C T C G A A C G T A T C G T G A C G T A C C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GACATGCCTG-
---AGGCCTNG
 T A C G G C T A A T G C T C G A A C G T A T C G T G A C G T A C C G A T A T C G A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GACATGCCTG-
-GCATTCCAGN
 T A C G G C T A A T G C T C G A A C G T A T C G T G A C G T A C C G A T A T C G A C G T
A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GACATGCCTG-----
-ACATGCCCGGGCAT
 T A C G G C T A A T G C T C G A A C G T A T C G T G A C G T A C C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GACATGCCTG
CACATTCCAT
 T A C G G C T A A T G C T C G A A C G T A T C G T G A C G T A C C G A T A T C G
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T