Information for 17-GTGATCAGAC (Motif 42)

C A T G A C G T C T A G G T C A A C G T A T G C C G T A A T C G C G T A T G A C
Reverse Opposite:
A C T G A C G T A T G C C G A T A T C G C G T A C A G T A G T C C G T A G T A C
p-value:1e-7
log p-value:-1.695e+01
Information Content per bp:1.841
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif110.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets44.3 +/- 19.7bp
Average Position of motif in Background51.2 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0016.1_Cux1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GTGATCAGAC---
TNAGNTGATCAACCGGT
 A C G T A C G T A C G T A C G T C A T G A C G T C T A G G T C A A C G T A T G C C G T A A T C G C G T A T G A C A C G T A C G T A C G T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GTGATCAGAC--
----CCAGACAG
 C A T G A C G T C T A G G T C A A C G T A T G C C G T A A T C G C G T A T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GTGATCAGAC----
----CCAGACRSVB
 C A T G A C G T C T A G G T C A A C G T A T G C C G T A A T C G C G T A T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTGATCAGAC---
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T C A T G A C G T C T A G G T C A A C G T A T G C C G T A A T C G C G T A T G A C A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GTGATCAGAC--
----BCAGACWA
 C A T G A C G T C T A G G T C A A C G T A T G C C G T A A T C G C G T A T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTGATCAGAC
NBWGATAAGR-
 A C G T C A T G A C G T C T A G G T C A A C G T A T G C C G T A A T C G C G T A T G A C
T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTGATCAGAC------
CAAATCCAGACATCACA
 A C G T C A T G A C G T C T A G G T C A A C G T A T G C C G T A A T C G C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0023.1_Gata6_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTGATCAGAC---
TATAGAGATAAGAATTG
 A C G T A C G T A C G T A C G T C A T G A C G T C T A G G T C A A C G T A T G C C G T A A T C G C G T A T G A C A C G T A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGATCAGAC
NVAGATAAGR-
 A C G T C A T G A C G T C T A G G T C A A C G T A T G C C G T A A T C G C G T A T G A C
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T

GATA5/MA0766.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTGATCAGAC
-AGATAAGA-
 C A T G A C G T C T A G G T C A A C G T A T G C C G T A A T C G C G T A T G A C
A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T