Information for 6-CAAGTCTGTA (Motif 7)

T A G C G T C A G C T A T C A G C G A T T A G C C G A T C T A G G A C T C T G A
Reverse Opposite:
G A C T C T G A G A T C C G T A A T C G G C T A A G T C C G A T A C G T A T C G
p-value:1e-15
log p-value:-3.632e+01
Information Content per bp:1.694
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif9.39%
Number of Background Sequences with motif1340.0
Percentage of Background Sequences with motif2.95%
Average Position of motif in Targets50.6 +/- 25.3bp
Average Position of motif in Background49.6 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CAAGTCTGTA
AAGGCAAGTGT---
 A C G T A C G T A C G T A C G T T A G C G T C A G C T A T C A G C G A T T A G C C G A T C T A G G A C T C T G A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAAGTCTGTA
-TWGTCTGV-
 T A G C G T C A G C T A T C A G C G A T T A G C C G A T C T A G G A C T C T G A
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAAGTCTGTA
CAGGTGAGG-
 T A G C G T C A G C T A T C A G C G A T T A G C C G A T C T A G G A C T C T G A
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTCTGTA
GCACGTAY---
 A C G T T A G C G T C A G C T A T C A G C G A T T A G C C G A T C T A G G A C T C T G A
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAAGTCTGTA
VBSYGTCTGG-
 A C G T T A G C G T C A G C T A T C A G C G A T T A G C C G A T C T A G G A C T C T G A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTCTGTA
NTCAAGTGG---
 A C G T A C G T T A G C G T C A G C T A T C A G C G A T T A G C C G A T C T A G G A C T C T G A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAAGTCTGTA
GGCACGTGTC--
 A C G T A C G T T A G C G T C A G C T A T C A G C G A T T A G C C G A T C T A G G A C T C T G A
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T

TP73/MA0861.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAAGTCTGTA------
GACATGTCTGGACATGTC
 A C G T A C G T T A G C G T C A G C T A T C A G C G A T T A G C C G A T C T A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G T C G A A G T C C T G A C G A T T A C G G A C T G A T C A G C T C T A G C T A G C T G A A G T C C G T A G A C T A T C G G A C T G T A C

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAAGTCTGTA
AACAGGTGT---
 A C G T A C G T T A G C G T C A G C T A T C A G C G A T T A G C C G A T C T A G G A C T C T G A
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTCTGTA
GCACGTNC---
 A C G T T A G C G T C A G C T A T C A G C G A T T A G C C G A T C T A G G A C T C T G A
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T