Information for 15-TGCATGCACA (Motif 38)

A G C T T C A G T A G C T C G A C G A T A T C G A G T C G T C A A T G C C G T A
Reverse Opposite:
A C G T A T C G A C G T T C A G T A G C C G T A A G C T A T C G A G T C C T G A
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.748
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.28%
Number of Background Sequences with motif562.0
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets47.2 +/- 23.6bp
Average Position of motif in Background48.9 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGCATGCACA----
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A G C T T C A G T A G C T C G A C G A T A T C G A G T C G T C A A T G C C G T A A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGCATGCACA-
-CCAGGAACAG
 A G C T T C A G T A G C T C G A C G A T A T C G A G T C G T C A A T G C C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGCATGCACA----
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A G C T T C A G T A G C T C G A C G A T A T C G A G T C G T C A A T G C C G T A A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCATGCACA
TCCAATCCACA
 A C G T A G C T T C A G T A G C T C G A C G A T A T C G A G T C G T C A A T G C C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGCATGCACA-
CCATTGTATGCAAAT
 A C G T A C G T A C G T A C G T A G C T T C A G T A G C T C G A C G A T A T C G A G T C G T C A A T G C C G T A A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCATGCACA-------
-CGAAGCACACAAAATA
 A G C T T C A G T A G C T C G A C G A T A T C G A G T C G T C A A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGCATGCACA---
AAAATACATGTAAAAAT
 A C G T A C G T A C G T A C G T A G C T T C A G T A G C T C G A C G A T A T C G A G T C G T C A A T G C C G T A A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCATGCACA----
-ATATGCAAATNNN
 A G C T T C A G T A G C T C G A C G A T A T C G A G T C G T C A A T G C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGCATGCACA---
YATGCATATRCATRT
 A C G T A C G T A G C T T C A G T A G C T C G A C G A T A T C G A G T C G T C A A T G C C G T A A C G T A C G T A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGCATGCACA-------
-AGCGGCACACACGCAA
 A G C T T C A G T A G C T C G A C G A T A T C G A G T C G T C A A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A