Information for 21-AGGGCTAGYTGAM (Motif 40)

C G T A A C T G C T A G A C T G G T A C A C G T C T G A A C T G A G C T C A G T C T A G C T G A T G C A
Reverse Opposite:
A C G T A G C T A G T C G C T A T C G A G T A C G A C T C G T A A C T G A G T C A G T C A G T C A C G T
p-value:1e-7
log p-value:-1.805e+01
Information Content per bp:1.730
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif26.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.8 +/- 27.2bp
Average Position of motif in Background54.3 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGGCTAGYTGAM--
AGGNCANNGTGACCT
 C G T A A C T G C T A G A C T G G T A C A C G T C T G A A C T G A G C T C A G T C T A G C T G A T G C A A C G T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGGCTAGYTGAM
AGGCCTNG-----
 C G T A A C T G C T A G A C T G G T A C A C G T C T G A A C T G A G C T C A G T C T A G C T G A T G C A
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGGCTAGYTGAM
AGGCCTAG-----
 C G T A A C T G C T A G A C T G G T A C A C G T C T G A A C T G A G C T C A G T C T A G C T G A T G C A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGGCTAGYTGAM----
ANNNCTAGTTAACNGNN
 C G T A A C T G C T A G A C T G G T A C A C G T C T G A A C T G A G C T C A G T C T A G C T G A T G C A A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGGCTAGYTGAM-
NAGGTCACNNTGACC
 A C G T C G T A A C T G C T A G A C T G G T A C A C G T C T G A A C T G A G C T C A G T C T A G C T G A T G C A A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCTAGYTGAM
TNNGGGCAG------
 A C G T A C G T C G T A A C T G C T A G A C T G G T A C A C G T C T G A A C T G A G C T C A G T C T A G C T G A T G C A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGGGCTAGYTGAM
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T C G T A A C T G C T A G A C T G G T A C A C G T C T G A A C T G A G C T C A G T C T A G C T G A T G C A
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0107.1_Ascl2_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGGGCTAGYTGAM
NATNGGGNGGGGANAN
 A C G T A C G T A C G T C G T A A C T G C T A G A C T G G T A C A C G T C T G A A C T G A G C T C A G T C T A G C T G A T G C A
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

ESR1/MA0112.3/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCTAGYTGAM---
CAGGTCACCGTGACCTT
 A C G T C G T A A C T G C T A G A C T G G T A C A C G T C T G A A C T G A G C T C A G T C T A G C T G A T G C A A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGGGCTAGYTGAM
--GGCGCGCT---
 C G T A A C T G C T A G A C T G G T A C A C G T C T G A A C T G A G C T C A G T C T A G C T G A T G C A
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T