Information for 12-KTGTTCTGCCTGCAAW (Motif 21)

A C G T C A G T A C T G A C G T A C G T A G T C A C G T A C T G A G T C G A T C C G A T A C T G A T G C G C T A G C T A C G A T
Reverse Opposite:
G C T A C A G T C G A T A T C G A G T C C G T A C T A G T A C G G T A C C G T A A C T G G T C A G T C A G T A C G T C A G T C A
p-value:1e-11
log p-value:-2.551e+01
Information Content per bp:1.788
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.6 +/- 25.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:KTGTTCTGCCTGCAAW--
-NNTNNTGTCTGGNNTNG
 A C G T C A G T A C T G A C G T A C G T A G T C A C G T A C T G A G T C G A T C C G A T A C T G A T G C G C T A G C T A C G A T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:KTGTTCTGCCTGCAAW
-----CTGTCTGG---
 A C G T C A G T A C T G A C G T A C G T A G T C A C G T A C T G A G T C G A T C C G A T A C T G A T G C G C T A G C T A C G A T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:KTGTTCTGCCTGCAAW-
---TTTTGGCGGGAAAA
 A C G T C A G T A C T G A C G T A C G T A G T C A C G T A C T G A G T C G A T C C G A T A C T G A T G C G C T A G C T A C G A T A C G T
A C G T A C G T A C G T C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:KTGTTCTGCCTGCAAW
-----CTTCCNGGAA-
 A C G T C A G T A C T G A C G T A C G T A G T C A C G T A C T G A G T C G A T C C G A T A C T G A T G C G C T A G C T A C G A T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:KTGTTCTGCCTGCAAW
--GTGCCGTGTGCAAA
 A C G T C A G T A C T G A C G T A C G T A G T C A C G T A C T G A G T C G A T C C G A T A C T G A T G C G C T A G C T A C G A T
A C G T A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:KTGTTCTGCCTGCAAW--
----NCTTCCNGGAAGNN
 A C G T C A G T A C T G A C G T A C G T A G T C A C G T A C T G A G T C G A T C C G A T A C T G A T G C G C T A G C T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:KTGTTCTGCCTGCAAW
-----CTTCTGGGAAA
 A C G T C A G T A C T G A C G T A C G T A G T C A C G T A C T G A G T C G A T C C G A T A C T G A T G C G C T A G C T A C G A T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:KTGTTCTGCCTGCAAW
-----TWGTCTGV---
 A C G T C A G T A C T G A C G T A C G T A G T C A C G T A C T G A G T C G A T C C G A T A C T G A T G C G C T A G C T A C G A T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:KTGTTCTGCCTGCAAW
--GGTCTGGCAT----
 A C G T C A G T A C T G A C G T A C G T A G T C A C G T A C T G A G T C G A T C C G A T A C T G A T G C G C T A G C T A C G A T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:KTGTTCTGCCTGCAAW
---VBSYGTCTGG---
 A C G T C A G T A C T G A C G T A C G T A G T C A C G T A C T G A G T C G A T C C G A T A C T G A T G C G C T A G C T A C G A T
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T