Information for 15-TGTTTWATTAAGGGAG (Motif 27)

C G A T A C T G A G C T A C G T A C G T G C A T C G T A C G A T G A C T C G T A C T G A A C T G A C T G C A T G C G T A A C T G
Reverse Opposite:
G T A C G C A T G A T C A G T C A G T C A G C T G A C T C T G A C G T A A C G T C G T A C G T A C G T A T C G A G T A C C G T A
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.749
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 20.4bp
Average Position of motif in Background44.7 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13/MA0909.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTTTWATTAAGGGAG
-NTTTTATTGG-----
 C G A T A C T G A G C T A C G T A C G T G C A T C G T A C G A T G A C T C G T A C T G A A C T G A C T G C A T G C G T A A C T G
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGTTTWATTAAGGGAG
--TTTAAT--------
 C G A T A C T G A G C T A C G T A C G T G C A T C G T A C G A T G A C T C G T A C T G A A C T G A C T G C A T G C G T A A C T G
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTWATTAAGGGAG
NNANTTTTATTGGNNN--
 A C G T A C G T C G A T A C T G A G C T A C G T A C G T G C A T C G T A C G A T G A C T C G T A C T G A A C T G A C T G C A T G C G T A A C T G
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTWATTAAGGGAG
NNNTTTTAATTAANNNN-
 A C G T A C G T C G A T A C T G A G C T A C G T A C G T G C A T C G T A C G A T G A C T C G T A C T G A A C T G A C T G C A T G C G T A A C T G
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGTTTWATTAAGGGAG
--TTTTATTRGN----
 C G A T A C T G A G C T A C G T A C G T G C A T C G T A C G A T G A C T C G T A C T G A A C T G A C T G C A T G C G T A A C T G
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGTTTWATTAAGGGAG
--TTTAATTGCN----
 C G A T A C T G A G C T A C G T A C G T G C A T C G T A C G A T G A C T C G T A C T G A A C T G A C T G C A T G C G T A A C T G
A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T A C G T A C G T

PH0173.1_Uncx/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGTTTWATTAAGGGAG
CATAATTAATTAACGCG-
 A C G T A C G T C G A T A C T G A G C T A C G T A C G T G C A T C G T A C G A T G A C T C G T A C T G A A C T G A C T G C A T G C G T A A C T G
T G A C C T G A G C A T C T G A T G C A A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G T C T A C G T A G C A C T G A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGTTTWATTAAGGGAG
--TTTTATKRGG----
 C G A T A C T G A G C T A C G T A C G T G C A T C G T A C G A T G A C T C G T A C T G A A C T G A C T G C A T G C G T A A C T G
A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGTTTWATTAAGGGAG
-TTTTTATTGG-----
 C G A T A C T G A G C T A C G T A C G T G C A T C G T A C G A T G A C T C G T A C T G A A C T G A C T G C A T G C G T A A C T G
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGTTTWATTAAGGGAG
-NTTTTATTGG-----
 C G A T A C T G A G C T A C G T A C G T G C A T C G T A C G A T G A C T C G T A C T G A A C T G A C T G C A T G C G T A A C T G
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T