Information for 10-GCAGAATAAAGAA (Motif 16)

A C T G A G T C C G T A C T A G G T C A C G T A A G C T C G T A C G T A C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A C G T A C G T C T G A A C G T A C G T A G T C A C G T A C T G A G T C
p-value:1e-11
log p-value:-2.551e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.6 +/- 31.0bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCAGAATAAAGAA---
ATAAGAACAAAGGACTA
 A C G T A C T G A G T C C G T A C T A G G T C A C G T A A G C T C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCAGAATAAAGAA---
AGAAGAACAAAGGACTA
 A C G T A C T G A G T C C G T A C T A G G T C A C G T A A G C T C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCAGAATAAAGAA
--GGAACAAAGR-
 A C T G A G T C C G T A C T A G G T C A C G T A A G C T C G T A C G T A C G T A A C T G C G T A C G T A
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GCAGAATAAAGAA--
----AATAAACAATN
 A C T G A G T C C G T A C T A G G T C A C G T A A G C T C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCAGAATAAAGAA
--AAAACAAAGG-
 A C T G A G T C C G T A C T A G G T C A C G T A A G C T C G T A C G T A C G T A A C T G C G T A C G T A
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCAGAATAAAGAA
---AAATAAACA-
 A C T G A G T C C G T A C T A G G T C A C G T A A G C T C G T A C G T A C G T A A C T G C G T A C G T A
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCAGAATAAAGAA
ATTTGCATAACAAAG--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C T A G G T C A C G T A A G C T C G T A C G T A C G T A A C T G C G T A C G T A
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAGAATAAAGAA-
CAAACGTAAACAAT
 A C T G A G T C C G T A C T A G G T C A C G T A A G C T C G T A C G T A C G T A A C T G C G T A C G T A A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCAGAATAAAGAA-----
--AAAGTAAACAAAAATT
 A C T G A G T C C G T A C T A G G T C A C G T A A G C T C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCAGAATAAAGAA--
---AAACAAACATTC
 A C T G A G T C C G T A C T A G G T C A C G T A A G C T C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C