Information for 13-CCTATTTTGGTTT (Motif 25)

A G T C A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A G T A C A G T C G T C A C G T A C G T A C G T A A G C T C G T A C T A G C T A G
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.3 +/- 28.8bp
Average Position of motif in Background40.5 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCTATTTTGGTTT-
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A G T C A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTATTTTGGTTT
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T A G T C A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCTATTTTGGTTT
-CTATTTTTGG--
 A G T C A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T A C G T
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCTATTTTGGTTT
---NNTGTGGTTT
 A G T C A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

IRF8/MA0652.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCTATTTTGGTTT---
--AGTTTCGGTTTCGN
 A G T C A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCTATTTTGGTTT-
TTCTATTTTTAGNNN
 A C G T A G T C A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCTATTTTGGTTT-
----CTGTGGTTTN
 A G T C A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCTATTTTGGTTT
KCTATTTTTRGH-
 A G T C A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCTATTTTGGTTT-
--RSTTTCRSTTTC
 A G T C A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T A C G T A C G T
A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTATTTTGGTTT
GCTATTTTTGGM-
 A G T C A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G C T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T