Homer de novo Motif Results (hs_HEK293T_HEK293Tsta_undef_HA_SRX746178_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 598
Total background sequences = 42724
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C G A G T A C A G T C C G T A A T G C G A T C C T G A A C T G T C G A A C T G A C T G A C T G G T A C 1e-26-6.173e+014.84%0.25%25.4bp (30.1bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.904)
More Information | Similar Motifs Found
motif file (matrix)
2 C T G A A G T C C G T A A C G T C T A G A C G T A C T G G C T A A G T C C G T A A G C T C T A G A T C G T G C A C G A T C T A G 1e-16-3.842e+011.17%0.00%15.0bp (9.1bp)USF2/MA0526.1/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
3 C A G T A C T G G T A C C T G A T A G C T C G A G A C T C T A G A C G T A C T G A G T C G T C A A G C T C T G A G A T C T C G A 1e-15-3.519e+011.50%0.02%25.2bp (1.7bp)Pou2f3/MA0627.1/Jaspar(0.657)
More Information | Similar Motifs Found
motif file (matrix)
4 A C G T A C G T C T A G A G C T A C G T C G A T C G A T C T G A A C T G A C T G C T G A C G T A A C G T A C T G A C G T C T A G 1e-13-3.220e+011.00%0.00%27.9bp (6.0bp)TEAD1/MA0090.2/Jaspar(0.662)
More Information | Similar Motifs Found
motif file (matrix)
5 A T C G G T A C C G T A A C T G T A C G A G C T A C T G G T A C C G T A A C T G C G A T T A G C G T A C 1e-12-2.873e+013.34%0.37%27.8bp (42.4bp)Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer(0.809)
More Information | Similar Motifs Found
motif file (matrix)
6 G T C A G T A C C G T A T A C G A G C T T G A C C G T A A T G C A G T C C G T A T G A C T C G A C G T A G T A C T A G C A C G T 1e-12-2.831e+011.50%0.03%16.1bp (30.6bp)ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer(0.604)
More Information | Similar Motifs Found
motif file (matrix)
7 T C G A A C T G C G T A G T C A A C T G A G T C C G T A A T G C A G T C T C G A 1e-12-2.826e+012.67%0.21%21.6bp (39.1bp)POL008.1_DCE_S_I/Jaspar(0.667)
More Information | Similar Motifs Found
motif file (matrix)
8 C T G A A G T C C G T A A C T G A G T C A C G T A C G T A C T G A G T C A T G C A G T C C G T A A C G T 1e-12-2.805e+011.00%0.01%22.2bp (29.6bp)NRF1/MA0506.1/Jaspar(0.601)
More Information | Similar Motifs Found
motif file (matrix)
9 A C G T A C T G A T C G A G T C A C G T A C G T A C G T C G T A G T A C A G T C C G A T C T G A G A C T A G T C G T C A A C T G 1e-12-2.805e+011.00%0.01%32.8bp (16.0bp)Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer(0.589)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C T G C G T A C G T A A G C T C T G A C G T A G T C A A C T G G T C A A C G T A C T G G T A C A G C T 1e-11-2.720e+011.17%0.01%23.5bp (8.8bp)Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer(0.648)
More Information | Similar Motifs Found
motif file (matrix)
11 * C T A G A C G T A G C T A C T G A G T C A C T G A T G C T A G C A G T C A C G T 1e-11-2.648e+011.50%0.04%26.3bp (27.9bp)CEBPG/MA0838.1/Jaspar(0.652)
More Information | Similar Motifs Found
motif file (matrix)
12 * T G A C G A T C G C A T A T G C A G T C G T A C C G A T A C T G G A T C G T A C C T A G T C A G T A G C G A T C A C G T A G C T 1e-11-2.633e+014.84%0.97%25.8bp (31.3bp)EWSR1-FLI1/MA0149.1/Jaspar(0.579)
More Information | Similar Motifs Found
motif file (matrix)
13 * A G T C A C G T A T C G C G A T A G T C A T G C A C T G A C G T C G A T A G C T A G T C A G T C C T A G 1e-11-2.614e+010.83%0.00%15.7bp (3.0bp)IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer(0.647)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C G T C G T A A G T C C G T A A C T G A G T C A T C G A G T C C G T A C G T A A C T G A T C G A G T C 1e-11-2.614e+010.83%0.00%18.8bp (3.6bp)PH0158.1_Rhox11_2/Jaspar(0.604)
More Information | Similar Motifs Found
motif file (matrix)
15 * C G T A A G C T C G A T A G T C C G T A C T G A T A G C G C T A A G T C C G T A A C T G C G T A A G T C 1e-11-2.614e+010.83%0.00%36.5bp (0.0bp)PB0178.1_Sox8_2/Jaspar(0.649)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G A T A T C G A G T C C A G T A G T C A G T C A C G T A C G T A C G T A G T C C G A T A G T C A C G T A T C G T A C G A T C G 1e-11-2.614e+010.83%0.00%21.3bp (0.0bp)PB0137.1_Irf3_2/Jaspar(0.718)
More Information | Similar Motifs Found
motif file (matrix)
17 * G T A C G C T A A G T C C T A G C T A G A C G T A C T G A C G T A T G C G A T C A C G T A G T C T A G C A C G T A G T C G A T C 1e-11-2.614e+010.83%0.00%16.3bp (4.1bp)GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer(0.580)
More Information | Similar Motifs Found
motif file (matrix)
18 * A T G C C G A T T A G C A T G C G T C A G C T A A G T C A C G T A T G C T C G A T C G A G T C A A C G T C T A G A G C T C G T A 1e-11-2.595e+011.50%0.04%24.6bp (26.8bp)PB0114.1_Egr1_2/Jaspar(0.607)
More Information | Similar Motifs Found
motif file (matrix)
19 * G T C A A G T C G T C A T G A C C T A G G C A T A G T C G T C A A T G C A C G T A C T G T C G A A G T C T A G C A C G T A C T G 1e-11-2.572e+011.34%0.03%25.4bp (16.7bp)FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer(0.657)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G A C G T C T A G G T A C T C G A A G T C C T G A T C A G C T G A C A T G A C T G A C T G C G T A A T C G G C A T A C T G 1e-10-2.487e+011.17%0.02%13.0bp (15.1bp)PB0207.1_Zic3_2/Jaspar(0.622)
More Information | Similar Motifs Found
motif file (matrix)
21 * C G T A C G T A A C T G G T A C T A C G C G T A C G T A A C G T A C T G A C G T A C T G C T A G A G T C 1e-9-2.268e+010.83%0.01%19.9bp (6.9bp)Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer(0.645)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C G T A T C G C G T A G T A C C G T A C T A G T A C G A G T C C G T A A G C T C T A G A C G T A C G T 1e-9-2.268e+010.83%0.00%15.4bp (7.5bp)MEIS2/MA0774.1/Jaspar(0.641)
More Information | Similar Motifs Found
motif file (matrix)
23 * C G T A C A T G G C T A C G T A T C G A A C T G A G T C G C T A A T C G G T C A A G C T G T A C A G T C 1e-9-2.169e+011.84%0.12%31.0bp (39.5bp)Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer(0.623)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C G T A T G C G A T C C G A T C G T A C G T A A G C T A C G T T A G C A C T G C A G T C T A G G T C A 1e-8-2.072e+011.50%0.08%32.1bp (33.6bp)PH0039.1_Mnx1/Jaspar(0.588)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C T G C T A G G T A C T A C G A G T C A C G T A C T G G A C T T A C G A C G T C G T A C T A G G T A C C T G A A G T C A G T C 1e-8-2.067e+010.83%0.01%19.6bp (8.5bp)POL009.1_DCE_S_II/Jaspar(0.581)
More Information | Similar Motifs Found
motif file (matrix)
26 * C G T A A C G T A C T G C G T A A C G T A C T G A C T G C G A T A C T G C G A T C G T A A T G C A C G T 1e-8-2.025e+010.67%0.00%6.7bp (0.0bp)YY2/MA0748.1/Jaspar(0.563)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C G T A C T G A G C T A G C T G T C A C G T A A G C T C A T G A G T C C T A G A C T G A T C G T C A G A G C T A G T C A C G T 1e-8-2.025e+010.67%0.00%19.3bp (0.0bp)PB0024.1_Gcm1_1/Jaspar(0.543)
More Information | Similar Motifs Found
motif file (matrix)
28 * A G T C G T C A T G C A C G A T C T A G A G C T T A G C G A T C G A C T G C A T 1e-7-1.811e+0111.35%5.45%27.4bp (34.6bp)FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer(0.676)
More Information | Similar Motifs Found
motif file (matrix)
29 * G A T C A C G T T A C G G A T C G T C A C A G T A C G T C T G A T A G C C G T A C G A T A G C T T G C A G T A C C G T A A C G T 1e-7-1.749e+010.67%0.01%16.3bp (8.1bp)TEAD3/MA0808.1/Jaspar(0.584)
More Information | Similar Motifs Found
motif file (matrix)
30 * C G T A G T A C A G T C G A C T A C G T C G T A A G T C C G A T C T G A A C T G A C G T A C G T A C G T 1e-6-1.460e+010.50%0.00%27.5bp (3.1bp)PH0040.1_Hmbox1/Jaspar(0.613)
More Information | Similar Motifs Found
motif file (matrix)
31 * G T C A A G T C G C A T C G T A C T G A A T G C A G T C T C G A C G A T T G A C 1e-5-1.297e+012.34%0.49%20.8bp (38.2bp)PB0149.1_Myb_2/Jaspar(0.556)
More Information | Similar Motifs Found
motif file (matrix)
32 * A C T G C G A T C T A G T G A C G T A C C T A G C G A T A C G T C A G T A T C G G A T C T C G A C A G T A T C G G C A T T C A G 1e-4-1.114e+010.83%0.05%23.3bp (26.0bp)Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer(0.625)
More Information | Similar Motifs Found
motif file (matrix)
33 * A C T G C T G A A C G T A C T G A C T G A C G T C G T A C G T A A C G T C T A G A T C G A C T G A C T G 1e-4-9.232e+000.33%0.00%37.0bp (0.0bp)Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer(0.652)
More Information | Similar Motifs Found
motif file (matrix)
34 * A G T C A C G T C G T A A C T G A C G T A C G T A C G T C G T A A G T C C G T A 1e-1-3.585e+000.17%0.00%24.5bp (17.9bp)PH0168.1_Hnf1b/Jaspar(0.756)
More Information | Similar Motifs Found
motif file (matrix)