Information for 13-TGACAGGCATGTT (Motif 22)

A C G T A T C G C G T A G T A C C G T A C T A G T A C G A G T C C G T A A G C T C T A G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C T G A A C G T A C T G A G T C A G T C A C G T A C T G A C G T A T G C C G T A
p-value:1e-9
log p-value:-2.268e+01
Information Content per bp:1.852
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.4 +/- 15.4bp
Average Position of motif in Background47.7 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGACAGGCATGTT
TTGACAGC------
 A C G T A C G T A T C G C G T A G T A C C G T A C T A G T A C G A G T C C G T A A G C T C T A G A C G T A C G T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGACAGGCATGTT
TTGACAGG------
 A C G T A C G T A T C G C G T A G T A C C G T A C T A G T A C G A G T C C G T A A G C T C T A G A C G T A C G T
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGACAGGCATGTT-
---AAGGCAAGTGT
 A C G T A T C G C G T A G T A C C G T A C T A G T A C G A G T C C G T A A G C T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGACAGGCATGTT
NNATTGACAGGTGCTT-
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A G T A C C G T A C T A G T A C G A G T C C G T A A G C T C T A G A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGACAGGCATGTT
TTGACAG-------
 A C G T A C G T A T C G C G T A G T A C C G T A C T A G T A C G A G T C C G T A A G C T C T A G A C G T A C G T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGACAGGCATGTT
AGGTGHCAGACA----
 A C G T A C G T A C G T A C G T A T C G C G T A G T A C C G T A C T A G T A C G A G T C C G T A A G C T C T A G A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGACAGGCATGTT
VBTGWCAGCB-----
 A C G T A C G T A C G T A T C G C G T A G T A C C G T A C T A G T A C G A G T C C G T A A G C T C T A G A C G T A C G T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGACAGGCATGTT
AGGTGNCAGACAG---
 A C G T A C G T A C G T A C G T A T C G C G T A G T A C C G T A C T A G T A C G A G T C C G T A A G C T C T A G A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGACAGGCATGTT
GTATTGACAGGTNNTT-
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A G T A C C G T A C T A G T A C G A G T C C G T A A G C T C T A G A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T A C G T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGACAGGCATGTT-
--GCNGCCATCTTG
 A C G T A T C G C G T A G T A C C G T A C T A G T A C G A G T C C G T A A G C T C T A G A C G T A C G T A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G