Information for 6-TGGCTTNACCTATCMG (Motif 9)

A C G T A C T G A T C G A G T C A C G T A C G T A C G T C G T A G T A C A G T C C G A T C T G A G A C T A G T C G T C A A C T G
Reverse Opposite:
A G T C A C G T T C A G C G T A G A C T C G T A C T A G C A T G G C A T C G T A C G T A T C G A A C T G A T G C A G T C C G T A
p-value:1e-12
log p-value:-2.805e+01
Information Content per bp:1.734
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 32.8bp
Average Position of motif in Background48.5 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTTNACCTATCMG
GTGGCGTGACNG-----
 A C G T A C G T A C T G A T C G A G T C A C G T A C G T A C G T C G T A G T A C A G T C C G A T C T G A G A C T A G T C G T C A A C T G
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGGCTTNACCTATCMG
TGWCCTCARNTGACC-
 A C G T A C T G A T C G A G T C A C G T A C G T A C G T C G T A G T A C A G T C C G A T C T G A G A C T A G T C G T C A A C T G
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGCTTNACCTATCMG
NTTGGCANN---------
 A C G T A C G T A C G T A C T G A T C G A G T C A C G T A C G T A C G T C G T A G T A C A G T C C G A T C T G A G A C T A G T C G T C A A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGGCTTNACCTATCMG
TTGGCA-----------
 A C G T A C G T A C T G A T C G A G T C A C G T A C G T A C G T C G T A G T A C A G T C C G A T C T G A G A C T A G T C G T C A A C T G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTTNACCTATCMG
ATGGGGTGAT-------
 A C G T A C G T A C T G A T C G A G T C A C G T A C G T A C G T C G T A G T A C A G T C C G A T C T G A G A C T A G T C G T C A A C T G
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGGCTTNACCTATCMG-
-----TGACCTTTNCNT
 A C G T A C T G A T C G A G T C A C G T A C G T A C G T C G T A G T A C A G T C C G A T C T G A G A C T A G T C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGGCTTNACCTATCMG-
-NNNNTGACCTTTNNNN
 A C G T A C T G A T C G A G T C A C G T A C G T A C G T C G T A G T A C A G T C C G A T C T G A G A C T A G T C G T C A A C T G A C G T
A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGCTTNACCTATCMG
TGACCTYA--------
 A C G T A C T G A T C G A G T C A C G T A C G T A C G T C G T A G T A C A G T C C G A T C T G A G A C T A G T C G T C A A C T G
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTTNACCTATCMG
TTGACTTTT--------
 A C G T A C G T A C T G A T C G A G T C A C G T A C G T A C G T C G T A G T A C A G T C C G A T C T G A G A C T A G T C G T C A A C T G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGGCTTNACCTATCMG
ATGGGGTGAT-------
 A C G T A C G T A C T G A T C G A G T C A C G T A C G T A C G T C G T A G T A C A G T C C G A T C T G A G A C T A G T C G T C A A C T G
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T