Information for 2-AGAAGCACCA (Motif 7)

T C G A A C T G C G T A G T C A A C T G A G T C C G T A A T G C A G T C T C G A
Reverse Opposite:
A G C T C T A G A T C G C G A T C T A G T G A C A C G T A C G T A G T C A G C T
p-value:1e-12
log p-value:-2.826e+01
Information Content per bp:1.836
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif90.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets44.8 +/- 21.6bp
Average Position of motif in Background50.0 +/- 39.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGAAGCACCA
NGAAGC----
 T C G A A C T G C G T A G T C A A C T G A G T C C G T A A T G C A G T C T C G A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGAAGCACCA
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T A C G T T C G A A C T G C G T A G T C A A C T G A G T C C G T A A T G C A G T C T C G A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGAAGCACCA-----------
-GAAGTANCACGAATNMRAGT
 T C G A A C T G C G T A G T C A A C T G A G T C C G T A A T G C A G T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAAGCACCA
GGGAGGACNG
 T C G A A C T G C G T A G T C A A C T G A G T C C G T A A T G C A G T C T C G A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGAAGCACCA-
AGGAAACAGCTG
 A C G T T C G A A C T G C G T A G T C A A C T G A G T C C G T A A T G C A G T C T C G A A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AGAAGCACCA
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C G T A G T C A A C T G A G T C C G T A A T G C A G T C T C G A
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGAAGCACCA----
CATAAGACCACCATTAC
 A C G T A C G T A C G T T C G A A C T G C G T A G T C A A C T G A G T C C G T A A T G C A G T C T C G A A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------AGAAGCACCA
AGCAACAGCCGCACC-
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C G T A G T C A A C T G A G T C C G T A A T G C A G T C T C G A
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGAAGCACCA
GGAAANCCCC
 T C G A A C T G C G T A G T C A A C T G A G T C C G T A A T G C A G T C T C G A
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGAAGCACCA----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T T C G A A C T G C G T A G T C A A C T G A G T C C G T A A T G C A G T C T C G A A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G