Information for 5-MCAGTCACCWCAACCT (Motif 6)

G T C A G T A C C G T A T A C G A G C T T G A C C G T A A T G C A G T C C G T A T G A C T C G A C G T A G T A C T A G C A C G T
Reverse Opposite:
C G T A A C T G C A T G C G A T A G C T A C T G C G A T A C T G A T C G A C G T A C T G T C G A A T G C C G A T A C T G C A G T
p-value:1e-12
log p-value:-2.831e+01
Information Content per bp:1.675
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.1 +/- 16.1bp
Average Position of motif in Background44.5 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:MCAGTCACCWCAACCT--
------ACCACATCCTGT
 G T C A G T A C C G T A T A C G A G C T T G A C C G T A A T G C A G T C C G T A T G A C T C G A C G T A G T A C T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:MCAGTCACCWCAACCT
---NWAACCACADNN-
 G T C A G T A C C G T A T A C G A G C T T G A C C G T A A T G C A G T C C G T A T G A C T C G A C G T A G T A C T A G C A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:MCAGTCACCWCAACCT
----AAACCACAGC--
 G T C A G T A C C G T A T A C G A G C T T G A C C G T A A T G C A G T C C G T A T G A C T C G A C G T A G T A C T A G C A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:MCAGTCACCWCAACCT
---NAAACCACAG---
 G T C A G T A C C G T A T A C G A G C T T G A C C G T A A T G C A G T C C G T A T G A C T C G A C G T A G T A C T A G C A C G T
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:MCAGTCACCWCAACCT
----AAACCACAGAN-
 G T C A G T A C C G T A T A C G A G C T T G A C C G T A A T G C A G T C C G T A T G A C T C G A C G T A G T A C T A G C A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:forward strand
Alignment:MCAGTCACCWCAACCT
----AAACCACANN--
 G T C A G T A C C G T A T A C G A G C T T G A C C G T A A T G C A G T C C G T A T G A C T C G A C G T A G T A C T A G C A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:MCAGTCACCWCAACCT
----AAACCGCAAA--
 G T C A G T A C C G T A T A C G A G C T T G A C C G T A A T G C A G T C C G T A T G A C T C G A C G T A G T A C T A G C A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:MCAGTCACCWCAACCT
---GTCAGCANNTN--
 G T C A G T A C C G T A T A C G A G C T T G A C C G T A A T G C A G T C C G T A T G A C T C G A C G T A G T A C T A G C A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:MCAGTCACCWCAACCT
----AAACCGCAA---
 G T C A G T A C C G T A T A C G A G C T T G A C C G T A A T G C A G T C C G T A T G A C T C G A C G T A G T A C T A G C A C G T
A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-MCAGTCACCWCAACCT
CTGAGTCAGCAATTT--
 A C G T G T C A G T A C C G T A T A C G A G C T T G A C C G T A A T G C A G T C C G T A T G A C T C G A C G T A G T A C T A G C A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T