Information for 2-ACATGTGACATRGATG (Motif 2)

C T G A A G T C C G T A A C G T C T A G A C G T A C T G G C T A A G T C C G T A A G C T C T A G A T C G T G C A C G A T C T A G
Reverse Opposite:
A G T C C G T A A C G T T A G C G A T C T C G A C G A T A C T G C G A T G T A C T G C A A G T C G T C A A C G T A C T G A G C T
p-value:1e-16
log p-value:-3.842e+01
Information Content per bp:1.745
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.6 +/- 15.0bp
Average Position of motif in Background40.8 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACATGTGACATRGATG
GTCATGTGACC------
 A C G T C T G A A G T C C G T A A C G T C T A G A C G T A C T G G C T A A G T C C G T A A G C T C T A G A T C G T G C A C G A T C T A G
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACATGTGACATRGATG
RTCATGTGAC-------
 A C G T C T G A A G T C C G T A A C G T C T A G A C G T A C T G G C T A A G T C C G T A A G C T C T A G A T C G T G C A C G A T C T A G
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACATGTGACATRGATG
GCCACGTGACC------
 A C G T C T G A A G T C C G T A A C G T C T A G A C G T A C T G G C T A A G T C C G T A A G C T C T A G A T C G T G C A C G A T C T A G
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACATGTGACATRGATG
AATATACATGTAAAACA----
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A A C G T C T A G A C G T A C T G G C T A A G T C C G T A A G C T C T A G A T C G T G C A C G A T C T A G
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACATGTGACATRGATG
AATATACATGTAAAATT----
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A A C G T C T A G A C G T A C T G G C T A A G T C C G T A A G C T C T A G A T C G T G C A C G A T C T A G
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACATGTGACATRGATG
ACCACGTGAC-------
 A C G T C T G A A G T C C G T A A C G T C T A G A C G T A C T G G C T A A G T C C G T A A G C T C T A G A T C G T G C A C G A T C T A G
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ACATGTGACATRGATG
AAAATACATGTAATACT----
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A A C G T C T A G A C G T A C T G G C T A A G T C C G T A A G C T C T A G A T C G T G C A C G A T C T A G
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACATGTGACATRGATG
KCCACGTGAC-------
 A C G T C T G A A G T C C G T A A C G T C T A G A C G T A C T G G C T A A G T C C G T A A G C T C T A G A T C G T G C A C G A T C T A G
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACATGTGACATRGATG
NCACGTGACN------
 C T G A A G T C C G T A A C G T C T A G A C G T A C T G G C T A A G T C C G T A A G C T C T A G A T C G T G C A C G A T C T A G
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----ACATGTGACATRGATG
AATATACATGTAATATA----
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A A C G T C T A G A C G T A C T G G C T A A G T C C G T A A G C T C T A G A T C G T G C A C G A T C T A G
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T A C G T A C G T A C G T