Information for 11-ACACGTCACTGRCNTG (Motif 19)

G T C A A G T C G T C A T G A C C T A G G C A T A G T C G T C A A T G C A C G T A C T G T C G A A G T C T A G C A C G T A C T G
Reverse Opposite:
G T A C G T C A A T C G A C T G A G C T A G T C C G T A T A C G A C G T A C T G C G T A A G T C A C T G A C G T T A C G C A G T
p-value:1e-11
log p-value:-2.572e+01
Information Content per bp:1.721
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.7 +/- 25.4bp
Average Position of motif in Background45.3 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ACACGTCACTGRCNTG
-NAGGTCANTGACCT-
 G T C A A G T C G T C A T G A C C T A G G C A T A G T C G T C A A T G C A C G T A C T G T C G A A G T C T A G C A C G T A C T G
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.56
Offset:9
Orientation:forward strand
Alignment:ACACGTCACTGRCNTG
---------TGACGT-
 G T C A A G T C G T C A T G A C C T A G G C A T A G T C G T C A A T G C A C G T A C T G T C G A A G T C T A G C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACACGTCACTGRCNTG
---TGACCTTGACCT-
 G T C A A G T C G T C A T G A C C T A G G C A T A G T C G T C A A T G C A C G T A C T G T C G A A G T C T A G C A C G T A C T G
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACACGTCACTGRCNTG
GTGCCACGTCATCA-----
 A C G T A C G T A C G T G T C A A G T C G T C A T G A C C T A G G C A T A G T C G T C A A T G C A C G T A C T G T C G A A G T C T A G C A C G T A C T G
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACACGTCACTGRCNTG
---TGACCTTGACCT-
 G T C A A G T C G T C A T G A C C T A G G C A T A G T C G T C A A T G C A C G T A C T G T C G A A G T C T A G C A C G T A C T G
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:ACACGTCACTGRCNTG-----
-------GATGACGTGGCANT
 G T C A A G T C G T C A T G A C C T A G G C A T A G T C G T C A A T G C A C G T A C T G T C G A A G T C T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:ACACGTCACTGRCNTG-
---------TGACCTYA
 G T C A A G T C G T C A T G A C C T A G G C A T A G T C G T C A A T G C A C G T A C T G T C G A A G T C T A G C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:ACACGTCACTGRCNTG
--------GTGACCTT
 G T C A A G T C G T C A T G A C C T A G G C A T A G T C G T C A A T G C A C G T A C T G T C G A A G T C T A G C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:ACACGTCACTGRCNTG
------NCGTGACN--
 G T C A A G T C G T C A T G A C C T A G G C A T A G T C G T C A A T G C A C G T A C T G T C G A A G T C T A G C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:ACACGTCACTGRCNTG
---------TGACCT-
 G T C A A G T C G T C A T G A C C T A G G C A T A G T C G T C A A T G C A C G T A C T G T C G A A G T C T A G C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T