Homer de novo Motif Results (hs_Embryonic_HUES64_normal_NANOG_SRX702040_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 797
Total background sequences = 47589
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C C G T A G A C T C G A T A T C G C G A T G T A C C G T A A C G T A C T G A G T C C G T A C T G A T G C A C G A T C A G T 1e-92-2.131e+0212.30%0.59%22.7bp (27.4bp)Pou5f1::Sox2/MA0142.1/Jaspar(0.970)
More Information | Similar Motifs Found		motif file (matrix)
2 T C A G T A G C G T C A A G T C C T G A A T C G A G T C C T G A A C T G A T C G C T A G C T A G T A C G 1e-49-1.146e+0213.30%2.11%23.3bp (30.1bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.967)
More Information | Similar Motifs Found		motif file (matrix)
3 C T G A C A T G C A G T C A T G A T C G A G T C A G T C G A C T A G C T A G C T A C T G G A C T A C G T A G C T A G T C A G C T 1e-28-6.549e+0122.46%9.17%24.7bp (28.7bp)Sox3/MA0514.1/Jaspar(0.887)
More Information | Similar Motifs Found		motif file (matrix)
4 T C G A C A G T A T C G A T G C G C A T T C G A C G T A C A G T A G C T C T G A 1e-23-5.355e+0113.80%4.63%24.7bp (32.6bp)Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer(0.865)
More Information | Similar Motifs Found		motif file (matrix)
5 A T C G C G A T A C T G C G T A A T C G A C G T A T G C C G T A A G C T A T G C 1e-16-3.846e+012.89%0.24%20.6bp (31.5bp)FOSL2/MA0478.1/Jaspar(0.918)
More Information | Similar Motifs Found		motif file (matrix)
6 C G T A T A C G G C T A C T A G A T C G C G T A C G T A A C G T A T C G G A T C 1e-16-3.841e+0110.92%3.90%24.2bp (31.0bp)TEAD4/MA0809.1/Jaspar(0.950)
More Information | Similar Motifs Found		motif file (matrix)
7 A C G T A T C G A G T C A G C T A C G T C G T A C G T A A C G T A C T G A C T G C G A T A C T G A G T C 1e-13-3.115e+010.75%0.00%14.6bp (0.0bp)Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer(0.648)
More Information | Similar Motifs Found		motif file (matrix)
8 C G T A A C G T C G A T A C T G A G C T A C G T A G T C G T A C G T A C C G A T A T C G A C G T A C T G 1e-12-2.908e+011.13%0.02%23.1bp (11.8bp)Sox5/MA0087.1/Jaspar(0.695)
More Information | Similar Motifs Found		motif file (matrix)
9 * C T A G T A C G A C T G T A C G T C A G A C T G C A T G T C A G C T A G C T A G C T A G T C A G T C A G C T A G C T A G T C A G 1e-11-2.727e+016.27%1.95%23.8bp (25.7bp)PB0097.1_Zfp281_1/Jaspar(0.878)
More Information | Similar Motifs Found		motif file (matrix)
10 * A C G T G T C A G T C A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G C T A G C T A G 1e-11-2.700e+010.75%0.01%26.1bp (23.0bp)Sox3/MA0514.1/Jaspar(0.686)
More Information | Similar Motifs Found		motif file (matrix)
11 * C T A G C T G A A G T C G A C T G T A C A G T C C G T A A G T C C G T A A C T G C T A G C T A G C A T G 1e-11-2.700e+010.75%0.00%22.5bp (11.2bp)ZNF354C/MA0130.1/Jaspar(0.674)
More Information | Similar Motifs Found		motif file (matrix)
12 * G T C A T A G C G T A C G C T A A C G T C G A T T A C G C G T A C T G A C T G A 1e-11-2.585e+012.13%0.22%19.0bp (29.5bp)LIN54/MA0619.1/Jaspar(0.687)
More Information | Similar Motifs Found		motif file (matrix)
13 * A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G A T 1e-10-2.526e+010.63%0.00%17.6bp (31.7bp)TCF7L2/MA0523.1/Jaspar(0.643)
More Information | Similar Motifs Found		motif file (matrix)
14 * C G T A C T A G C G A T A C G T A C G T C T A G C G T A G A T C C G A T A C T G A C T G A T G C G C A T 1e-10-2.525e+011.38%0.07%27.2bp (34.9bp)POL004.1_CCAAT-box/Jaspar(0.650)
More Information | Similar Motifs Found		motif file (matrix)
15 * C A G T A G T C G C A T A C G T A C T G A G T C G C T A A G C T G A C T A C G T G C A T G T C A C G T A 1e-10-2.459e+011.38%0.07%21.9bp (31.0bp)PB0146.1_Mafk_2/Jaspar(0.611)
More Information | Similar Motifs Found		motif file (matrix)
16 * A T C G A G T C A G T C A C G T C G T A G C T A A C G T T A G C G T A C A T C G 1e-10-2.391e+011.13%0.04%27.6bp (26.3bp)GSC2/MA0891.1/Jaspar(0.798)
More Information | Similar Motifs Found		motif file (matrix)
17 * A C T G G T C A A C T G C G A T A C T G A G T C C G A T A T C G A C G T C G A T 1e-10-2.364e+012.26%0.29%21.1bp (32.1bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.673)
More Information | Similar Motifs Found		motif file (matrix)
18 * G A C T C G T A A C G T A C G T C T G A G T A C A G C T C G T A A T G C G T A C A C G T A G C T C T A G 1e-9-2.155e+010.75%0.01%14.2bp (24.1bp)PB0096.1_Zfp187_1/Jaspar(0.654)
More Information | Similar Motifs Found		motif file (matrix)
19 * C T A G A C T G G T A C A G C T A C G T A C T G A G T C A G T C A C T G A G T C A C G T A G T C C G T A 1e-8-1.980e+010.63%0.01%14.4bp (18.6bp)Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer(0.602)
More Information | Similar Motifs Found		motif file (matrix)
20 * A C T G A C G T C G T A A C G T A C G T C T A G A G T C A C G T A T C G A C G T A G C T A C T G C G T A 1e-8-1.956e+010.50%0.00%27.6bp (0.0bp)PB0074.1_Sox8_1/Jaspar(0.578)
More Information | Similar Motifs Found		motif file (matrix)
21 * A C T G A C G T A C T G C G T A A C T G A G T C C G T A T A G C C G T A C T G A A C T G G T A C A C G T 1e-8-1.956e+010.50%0.00%14.5bp (0.0bp)PB0099.1_Zfp691_1/Jaspar(0.626)
More Information | Similar Motifs Found		motif file (matrix)
22 * A C G T A G C T A C G T A C T G G C T A A C G T A T C G A C G T C T A G C G T A C T G A A C G T A C T G 1e-8-1.891e+010.88%0.03%20.6bp (25.7bp)PB0082.1_Tcf3_1/Jaspar(0.649)
More Information | Similar Motifs Found		motif file (matrix)
23 * A C T G A G T C A C G T A T C G A C G T A C G T A C T G C G T A T A C G A G T C C G T A A C G T A G C T C G T A A G T C A G C T 1e-6-1.408e+010.38%0.00%29.1bp (0.0bp)NR2F1/MA0017.2/Jaspar(0.614)
More Information | Similar Motifs Found		motif file (matrix)