Information for 7-ATTGTTCCCTGTG (Motif 8)

C G T A A C G T C G A T A C T G A G C T A C G T A G T C G T A C G T A C C G A T A T C G A C G T A C T G
Reverse Opposite:
A G T C C G T A A T G C C G T A A C T G A C T G C T A G C G T A C T G A A G T C C G T A C G T A A C G T
p-value:1e-12
log p-value:-2.908e+01
Information Content per bp:1.862
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets70.0 +/- 23.1bp
Average Position of motif in Background24.3 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)-3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATTGTTCCCTGTG
ATTGTTA------
 C G T A A C G T C G A T A C T G A G C T A C G T A G T C G T A C G T A C C G A T A T C G A C G T A C T G
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTTCCCTGTG
CNNNTATTGTTCNNNNN-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T A C T G A G C T A C G T A G T C G T A C G T A C C G A T A T C G A C G T A C T G
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A A C G T

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATTGTTCCCTGTG
CCATTGTTC------
 A C G T A C G T C G T A A C G T C G A T A C T G A G C T A C G T A G T C G T A C G T A C C G A T A T C G A C G T A C T G
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTGTTCCCTGTG
ATTGTT-------
 C G T A A C G T C G A T A C T G A G C T A C G T A G T C G T A C G T A C C G A T A T C G A C G T A C T G
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTTCCCTGTG
NNTTTATTGTTCTNNN--
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T A C T G A G C T A C G T A G T C G T A C G T A C C G A T A T C G A C G T A C T G
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----ATTGTTCCCTGTG
AATCAATTGTTCCGCTA-
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T A C T G A G C T A C G T A G T C G T A C G T A C C G A T A T C G A C G T A C T G
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------ATTGTTCCCTGTG
ANNTCCATTGTTCNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T A C T G A G C T A C G T A G T C G T A C G T A C C G A T A T C G A C G T A C T G
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------ATTGTTCCCTGTG
ANNTCTATTGTTCNNNA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T A C T G A G C T A C G T A G T C G T A C G T A C C G A T A T C G A C G T A C T G
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATTGTTCCCTGTG
ATTGTTTAN----
 C G T A A C G T C G A T A C T G A G C T A C G T A G T C G T A C G T A C C G A T A T C G A C G T A C T G
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.65
Offset:-9
Orientation:reverse strand
Alignment:---------ATTGTTCCCTGTG
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G A T A C T G A G C T A C G T A G T C G T A C G T A C C G A T A T C G A C G T A C T G
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T