Information for 13-AGTKTGACTGGCW (Motif 14)

C G T A C T A G C G A T A C G T A C G T C T A G C G T A G A T C C G A T A C T G A C T G A T G C G C A T
Reverse Opposite:
C G T A T A C G A G T C A G T C G C T A C A T G G A C T A G T C C G T A G T C A C G T A A G T C A C G T
p-value:1e-10
log p-value:-2.525e+01
Information Content per bp:1.752
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif31.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.0 +/- 27.2bp
Average Position of motif in Background50.2 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AGTKTGACTGGCW---
----TGATTGGCTANN
 C G T A C T A G C G A T A C G T A C G T C T A G C G T A G A T C C G A T A C T G A C T G A T G C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGTKTGACTGGCW--
---BTGABTGACAGS
 C G T A C T A G C G A T A C G T A C G T C T A G C G T A G A T C C G A T A C T G A C T G A T G C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTKTGACTGGCW
-NTTTTATTGG--
 C G T A C T A G C G A T A C G T A C G T C T A G C G T A G A T C C G A T A C T G A C T G A T G C G C A T
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGTKTGACTGGCW-
NNAATTTTATTGGNTN
 A C G T A C G T C G T A C T A G C G A T A C G T A C G T C T A G C G T A G A T C C G A T A C T G A C T G A T G C G C A T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGTKTGACTGGCW
--TTTAATTGCN-
 C G T A C T A G C G A T A C G T A C G T C T A G C G T A G A T C C G A T A C T G A C T G A T G C G C A T
A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGTKTGACTGGCW-----
---CTGATTGGTCNATTT
 C G T A C T A G C G A T A C G T A C G T C T A G C G T A G A T C C G A T A C T G A C T G A T G C G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGTKTGACTGGCW--
AAATTCAAGTGGNTTN
 A C G T C G T A C T A G C G A T A C G T A C G T C T A G C G T A G A T C C G A T A C T G A C T G A T G C G C A T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0115.1_Nkx2-6/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGTKTGACTGGCW--
AATNTTAAGTGGNTNN
 A C G T C G T A C T A G C G A T A C G T A C G T C T A G C G T A G A T C C G A T A C T G A C T G A T G C G C A T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AGTKTGACTGGCW
-------TTGGCA
 C G T A C T A G C G A T A C G T A C G T C T A G C G T A G A T C C G A T A C T G A C T G A T G C G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGTKTGACTGGCW-
NNANTTTTATTGGNNN
 A C G T A C G T C G T A C T A G C G A T A C G T A C G T C T A G C G T A G A T C C G A T A C T G A C T G A T G C G C A T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G