Information for 8-TMMACACMAAGRG (Motif 10)

A C G T G T C A G T C A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G C T A G C T A G
Reverse Opposite:
A G T C A G T C G T A C A C G T A C G T A C G T A C T G A C G T A C T G C G A T A C G T A C G T C G T A
p-value:1e-11
log p-value:-2.700e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.7 +/- 26.1bp
Average Position of motif in Background31.0 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TMMACACMAAGRG
--AAAACAAAGG-
 A C G T G T C A G T C A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G C T A G C T A G
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TMMACACMAAGRG
--VRRACAAWGG-
 A C G T G T C A G T C A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G C T A G C T A G
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TMMACACMAAGRG--
AAACAGACAAAGGAAT
 A C G T A C G T G T C A G T C A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G C T A G C T A G A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TMMACACMAAGRG
----AACAAAGG-
 A C G T G T C A G T C A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G C T A G C T A G
A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TMMACACMAAGRG
-----ACAAAG--
 A C G T G T C A G T C A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G C T A G C T A G
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TMMACACMAAGRG
ATTTGCATACAATGG-
 A C G T A C G T A C G T A C G T G T C A G T C A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G C T A G C T A G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TMMACACMAAGRG--
CTCACACAATGGCGC
 A C G T G T C A G T C A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G C T A G C T A G A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TMMACACMAAGRG----
-----ACAAAGGNBCCT
 A C G T G T C A G T C A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G C T A G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TMMACACMAAGRG
----RACAAWGG-
 A C G T G T C A G T C A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G C T A G C T A G
A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TMMACACMAAGRG
--AAAACAATGG-
 A C G T G T C A G T C A C G T A A G T C C G T A A G T C G T C A C G T A C G T A A C T G C T A G C T A G
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T