Information for 6-TGCTTAATGGTGC (Motif 7)

A C G T A T C G A G T C A G C T A C G T C G T A C G T A A C G T A C T G A C T G C G A T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A G T C G T C A A C G T A C G T C G T A C T G A A C T G A T G C C G T A
p-value:1e-13
log p-value:-3.115e+01
Information Content per bp:1.932
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.5 +/- 14.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCTTAATGGTGC
TGATTGATGA---
 A C G T A T C G A G T C A G C T A C G T C G T A C G T A A C G T A C T G A C T G C G A T A C T G A G T C
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGCTTAATGGTGC
--GKTAATGR---
 A C G T A T C G A G T C A G C T A C G T C G T A C G T A A C G T A C T G A C T G C G A T A C T G A G T C
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGCTTAATGGTGC
---NTAATTGN--
 A C G T A T C G A G T C A G C T A C G T C G T A C G T A A C G T A C T G A C T G C G A T A C T G A G T C
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCTTAATGGTGC--
-CCTTAATNGNTTTT
 A C G T A T C G A G T C A G C T A C G T C G T A C G T A A C G T A C T G A C T G C G A T A C T G A G T C A C G T A C G T
A C G T A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGCTTAATGGTGC-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G C T A C G T C G T A C G T A A C G T A C T G A C T G C G A T A C T G A G T C A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NKX6-2/MA0675.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGCTTAATGGTGC
---TTAATTAN--
 A C G T A T C G A G T C A G C T A C G T C G T A C G T A A C G T A C T G A C T G C G A T A C T G A G T C
A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGCTTAATGGTGC
---CTAATKGV--
 A C G T A T C G A G T C A G C T A C G T C G T A C G T A A C G T A C T G A C T G C G A T A C T G A G T C
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGCTTAATGGTGC
---NTAATTGG--
 A C G T A T C G A G T C A G C T A C G T C G T A C G T A A C G T A C T G A C T G C G A T A C T G A G T C
A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCTTAATGGTGC
TGATTRATGGCY-
 A C G T A T C G A G T C A G C T A C G T C G T A C G T A A C G T A C T G A C T G C G A T A C T G A G T C
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCTTAATGGTGC
TGATTTATGGC--
 A C G T A T C G A G T C A G C T A C G T C G T A C G T A A C G T A C T G A C T G C G A T A C T G A G T C
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T