Information for 15-HATTACTACCTTG (Motif 18)

G A C T C G T A A C G T A C G T C T G A G T A C A G C T C G T A A T G C G T A C A C G T A G C T C T A G
Reverse Opposite:
A G T C C T G A C G T A A C T G A T C G C G A T C T G A A C T G A G C T G T C A C G T A C G A T C T G A
p-value:1e-9
log p-value:-2.155e+01
Information Content per bp:1.751
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.8 +/- 14.2bp
Average Position of motif in Background49.5 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-HATTACTACCTTG
TTATTAGTACATAN
 A C G T G A C T C G T A A C G T A C G T C T G A G T A C A G C T C G T A A T G C G T A C A C G T A G C T C T A G
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:HATTACTACCTTG
-ATTAACACCT--
 G A C T C G T A A C G T A C G T C T G A G T A C A G C T C G T A A T G C G T A C A C G T A G C T C T A G
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---HATTACTACCTTG
NNNTTTTACGACNTTN
 A C G T A C G T A C G T G A C T C G T A A C G T A C G T C T G A G T A C A G C T C G T A A T G C G T A C A C G T A G C T C T A G
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---HATTACTACCTTG
NNGTTTTACGACTTTA
 A C G T A C G T A C G T G A C T C G T A A C G T A C G T C T G A G T A C A G C T C G T A A T G C G T A C A C G T A G C T C T A G
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0077.1_Hoxd12/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----HATTACTACCTTG
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C G T C T G A G T A C A G C T C G T A A T G C G T A C A C G T A G C T C T A G
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

JUN/MA0488.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:HATTACTACCTTG-
-ATGACATCATCNN
 G A C T C G T A A C G T A C G T C T G A G T A C A G C T C G T A A T G C G T A C A C G T A G C T C T A G A C G T
A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

PH0067.1_Hoxc12/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----HATTACTACCTTG
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C G T C T G A G T A C A G C T C G T A A T G C G T A C A C G T A G C T C T A G
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:HATTACTACCTTG
--TTMACACCTT-
 G A C T C G T A A C G T A C G T C T G A G T A C A G C T C G T A A T G C G T A C A C G T A G C T C T A G
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:HATTACTACCTTG--
NATGACATCATCNNN
 G A C T C G T A A C G T A C G T C T G A G T A C A G C T C G T A A T G C G T A C A C G T A G C T C T A G A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----HATTACTACCTTG
ANNATTTTACGACNTNA
 A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C G T C T G A G T A C A G C T C G T A A T G C G T A C A C G T A G C T C T A G
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A