Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-78 | -1.819e+02 | 0.0000 | 259.0 | 32.50% | 4145.6 | 8.71% | motif file (matrix) |
svg |
2 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-67 | -1.562e+02 | 0.0000 | 85.0 | 10.66% | 346.1 | 0.73% | motif file (matrix) |
svg |
3 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-57 | -1.331e+02 | 0.0000 | 221.0 | 27.73% | 3937.6 | 8.28% | motif file (matrix) |
svg |
4 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-51 | -1.187e+02 | 0.0000 | 124.0 | 15.56% | 1362.9 | 2.86% | motif file (matrix) |
svg |
5 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-50 | -1.161e+02 | 0.0000 | 207.0 | 25.97% | 3869.4 | 8.13% | motif file (matrix) |
svg |
6 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-46 | -1.072e+02 | 0.0000 | 140.0 | 17.57% | 1953.9 | 4.11% | motif file (matrix) |
svg |
7 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-43 | -1.010e+02 | 0.0000 | 150.0 | 18.82% | 2362.9 | 4.97% | motif file (matrix) |
svg |
8 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-41 | -9.635e+01 | 0.0000 | 108.0 | 13.55% | 1276.4 | 2.68% | motif file (matrix) |
svg |
9 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-39 | -9.196e+01 | 0.0000 | 115.0 | 14.43% | 1525.8 | 3.21% | motif file (matrix) |
svg |
10 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-35 | -8.212e+01 | 0.0000 | 124.0 | 15.56% | 1963.7 | 4.13% | motif file (matrix) |
svg |
11 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-33 | -7.813e+01 | 0.0000 | 122.0 | 15.31% | 1986.7 | 4.18% | motif file (matrix) |
svg |
12 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-23 | -5.417e+01 | 0.0000 | 101.0 | 12.67% | 1883.3 | 3.96% | motif file (matrix) |
svg |
13 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-18 | -4.237e+01 | 0.0000 | 309.0 | 38.77% | 11661.7 | 24.51% | motif file (matrix) |
svg |
14 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-18 | -4.229e+01 | 0.0000 | 50.0 | 6.27% | 625.1 | 1.31% | motif file (matrix) |
svg |
15 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-17 | -4.039e+01 | 0.0000 | 59.0 | 7.40% | 902.7 | 1.90% | motif file (matrix) |
svg |
16 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-17 | -3.973e+01 | 0.0000 | 57.0 | 7.15% | 858.5 | 1.80% | motif file (matrix) |
svg |
17 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-12 | -2.882e+01 | 0.0000 | 194.0 | 24.34% | 6945.6 | 14.60% | motif file (matrix) |
svg |
18 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-11 | -2.666e+01 | 0.0000 | 30.0 | 3.76% | 364.9 | 0.77% | motif file (matrix) |
svg |
19 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-10 | -2.494e+01 | 0.0000 | 35.0 | 4.39% | 526.0 | 1.11% | motif file (matrix) |
svg |
20 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-10 | -2.453e+01 | 0.0000 | 45.0 | 5.65% | 838.7 | 1.76% | motif file (matrix) |
svg |
21 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-10 | -2.392e+01 | 0.0000 | 77.0 | 9.66% | 2020.4 | 4.25% | motif file (matrix) |
svg |
22 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-9 | -2.157e+01 | 0.0000 | 128.0 | 16.06% | 4358.0 | 9.16% | motif file (matrix) |
svg |
23 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-9 | -2.085e+01 | 0.0000 | 46.0 | 5.77% | 978.3 | 2.06% | motif file (matrix) |
svg |
24 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-8 | -2.050e+01 | 0.0000 | 32.0 | 4.02% | 532.6 | 1.12% | motif file (matrix) |
svg |
25 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-8 | -2.015e+01 | 0.0000 | 51.0 | 6.40% | 1180.5 | 2.48% | motif file (matrix) |
svg |
26 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-8 | -1.996e+01 | 0.0000 | 56.0 | 7.03% | 1373.8 | 2.89% | motif file (matrix) |
svg |
27 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-8 | -1.989e+01 | 0.0000 | 30.0 | 3.76% | 486.5 | 1.02% | motif file (matrix) |
svg |
28 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-8 | -1.952e+01 | 0.0000 | 44.0 | 5.52% | 951.8 | 2.00% | motif file (matrix) |
svg |
29 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-8 | -1.913e+01 | 0.0000 | 88.0 | 11.04% | 2723.0 | 5.72% | motif file (matrix) |
svg |
30 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-8 | -1.878e+01 | 0.0000 | 49.0 | 6.15% | 1157.3 | 2.43% | motif file (matrix) |
svg |
31 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-7 | -1.793e+01 | 0.0000 | 43.0 | 5.40% | 969.6 | 2.04% | motif file (matrix) |
svg |
32 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-7 | -1.792e+01 | 0.0000 | 26.0 | 3.26% | 411.5 | 0.86% | motif file (matrix) |
svg |
33 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-7 | -1.765e+01 | 0.0000 | 79.0 | 9.91% | 2420.8 | 5.09% | motif file (matrix) |
svg |
34 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-7 | -1.743e+01 | 0.0000 | 90.0 | 11.29% | 2915.5 | 6.13% | motif file (matrix) |
svg |
35 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-6 | -1.563e+01 | 0.0000 | 134.0 | 16.81% | 5120.5 | 10.76% | motif file (matrix) |
svg |
36 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-6 | -1.551e+01 | 0.0000 | 43.0 | 5.40% | 1059.6 | 2.23% | motif file (matrix) |
svg |
37 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-6 | -1.511e+01 | 0.0000 | 47.0 | 5.90% | 1230.0 | 2.59% | motif file (matrix) |
svg |
38 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-6 | -1.462e+01 | 0.0000 | 115.0 | 14.43% | 4288.5 | 9.01% | motif file (matrix) |
svg |
39 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-6 | -1.439e+01 | 0.0000 | 14.0 | 1.76% | 154.6 | 0.32% | motif file (matrix) |
svg |
40 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.398e+01 | 0.0000 | 55.0 | 6.90% | 1609.8 | 3.38% | motif file (matrix) |
svg |
41 |
| Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer | 1e-5 | -1.240e+01 | 0.0000 | 116.0 | 14.55% | 4544.9 | 9.55% | motif file (matrix) |
svg |
42 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-5 | -1.154e+01 | 0.0001 | 50.0 | 6.27% | 1535.8 | 3.23% | motif file (matrix) |
svg |
43 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-4 | -1.097e+01 | 0.0001 | 12.0 | 1.51% | 155.1 | 0.33% | motif file (matrix) |
svg |
44 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-4 | -1.094e+01 | 0.0001 | 18.0 | 2.26% | 329.9 | 0.69% | motif file (matrix) |
svg |
45 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-4 | -1.070e+01 | 0.0002 | 278.0 | 34.88% | 13410.3 | 28.18% | motif file (matrix) |
svg |
46 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-4 | -1.043e+01 | 0.0002 | 54.0 | 6.78% | 1780.3 | 3.74% | motif file (matrix) |
svg |
47 |
| Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-4 | -1.028e+01 | 0.0003 | 121.0 | 15.18% | 5022.7 | 10.56% | motif file (matrix) |
svg |
48 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-4 | -1.011e+01 | 0.0003 | 120.0 | 15.06% | 4991.4 | 10.49% | motif file (matrix) |
svg |
49 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-4 | -9.913e+00 | 0.0004 | 68.0 | 8.53% | 2459.4 | 5.17% | motif file (matrix) |
svg |
50 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.787e+00 | 0.0004 | 92.0 | 11.54% | 3625.8 | 7.62% | motif file (matrix) |
svg |
51 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -9.259e+00 | 0.0007 | 42.0 | 5.27% | 1329.1 | 2.79% | motif file (matrix) |
svg |
52 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-3 | -8.974e+00 | 0.0009 | 28.0 | 3.51% | 760.5 | 1.60% | motif file (matrix) |
svg |
53 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-3 | -8.407e+00 | 0.0015 | 27.0 | 3.39% | 747.5 | 1.57% | motif file (matrix) |
svg |
54 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -8.147e+00 | 0.0020 | 44.0 | 5.52% | 1493.0 | 3.14% | motif file (matrix) |
svg |
55 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-3 | -7.825e+00 | 0.0026 | 4.0 | 0.50% | 20.3 | 0.04% | motif file (matrix) |
svg |
56 |
| Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer | 1e-3 | -7.818e+00 | 0.0026 | 145.0 | 18.19% | 6604.8 | 13.88% | motif file (matrix) |
svg |
57 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-3 | -7.688e+00 | 0.0029 | 94.0 | 11.79% | 3960.9 | 8.32% | motif file (matrix) |
svg |
58 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -7.676e+00 | 0.0029 | 103.0 | 12.92% | 4422.7 | 9.30% | motif file (matrix) |
svg |
59 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-3 | -7.578e+00 | 0.0032 | 62.0 | 7.78% | 2382.2 | 5.01% | motif file (matrix) |
svg |
60 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-3 | -7.456e+00 | 0.0035 | 17.0 | 2.13% | 401.5 | 0.84% | motif file (matrix) |
svg |
61 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-3 | -7.313e+00 | 0.0040 | 165.0 | 20.70% | 7763.1 | 16.32% | motif file (matrix) |
svg |
62 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-3 | -7.043e+00 | 0.0051 | 56.0 | 7.03% | 2144.5 | 4.51% | motif file (matrix) |
svg |
63 |
| Sp1(Zf)/Promoter/Homer | 1e-3 | -7.017e+00 | 0.0052 | 22.0 | 2.76% | 613.2 | 1.29% | motif file (matrix) |
svg |
64 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-3 | -6.912e+00 | 0.0057 | 20.0 | 2.51% | 538.7 | 1.13% | motif file (matrix) |
svg |
65 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.857e+00 | 0.0059 | 72.0 | 9.03% | 2949.3 | 6.20% | motif file (matrix) |
svg |
66 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -6.761e+00 | 0.0064 | 29.0 | 3.64% | 921.7 | 1.94% | motif file (matrix) |
svg |
67 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -6.754e+00 | 0.0064 | 36.0 | 4.52% | 1232.2 | 2.59% | motif file (matrix) |
svg |
68 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.696e+00 | 0.0066 | 46.0 | 5.77% | 1699.2 | 3.57% | motif file (matrix) |
svg |
69 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -6.559e+00 | 0.0075 | 58.0 | 7.28% | 2289.4 | 4.81% | motif file (matrix) |
svg |
70 |
| RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-2 | -6.485e+00 | 0.0079 | 40.0 | 5.02% | 1437.0 | 3.02% | motif file (matrix) |
svg |
71 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-2 | -6.377e+00 | 0.0087 | 37.0 | 4.64% | 1306.6 | 2.75% | motif file (matrix) |
svg |
72 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.265e+00 | 0.0096 | 67.0 | 8.41% | 2767.5 | 5.82% | motif file (matrix) |
svg |
73 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-2 | -6.198e+00 | 0.0101 | 52.0 | 6.52% | 2033.3 | 4.27% | motif file (matrix) |
svg |
74 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.191e+00 | 0.0101 | 59.0 | 7.40% | 2377.8 | 5.00% | motif file (matrix) |
svg |
75 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -6.032e+00 | 0.0117 | 39.0 | 4.89% | 1427.9 | 3.00% | motif file (matrix) |
svg |
76 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -5.984e+00 | 0.0121 | 78.0 | 9.79% | 3360.0 | 7.06% | motif file (matrix) |
svg |
77 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.934e+00 | 0.0125 | 53.0 | 6.65% | 2110.0 | 4.43% | motif file (matrix) |
svg |
78 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -5.195e+00 | 0.0259 | 45.0 | 5.65% | 1794.3 | 3.77% | motif file (matrix) |
svg |
79 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -5.194e+00 | 0.0259 | 6.0 | 0.75% | 95.0 | 0.20% | motif file (matrix) |
svg |
80 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.089e+00 | 0.0280 | 156.0 | 19.57% | 7696.4 | 16.18% | motif file (matrix) |
svg |
81 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -5.080e+00 | 0.0280 | 10.0 | 1.25% | 230.1 | 0.48% | motif file (matrix) |
svg |
82 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.040e+00 | 0.0287 | 20.0 | 2.51% | 637.9 | 1.34% | motif file (matrix) |
svg |
83 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -4.874e+00 | 0.0335 | 70.0 | 8.78% | 3100.4 | 6.52% | motif file (matrix) |
svg |
84 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -4.797e+00 | 0.0358 | 108.0 | 13.55% | 5129.1 | 10.78% | motif file (matrix) |
svg |
85 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -4.720e+00 | 0.0382 | 13.0 | 1.63% | 360.8 | 0.76% | motif file (matrix) |
svg |
86 |
| IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer | 1e-2 | -4.695e+00 | 0.0387 | 24.0 | 3.01% | 839.6 | 1.76% | motif file (matrix) |
svg |