Information for 9-ACCATTGAAA (Motif 12)

G T C A T A G C G T A C G C T A A C G T C G A T T A C G C G T A C T G A C T G A
Reverse Opposite:
A G C T A G C T A C G T A T G C G C T A C G T A C G A T A C T G A T C G A C G T
p-value:1e-11
log p-value:-2.585e+01
Information Content per bp:1.835
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif104.6
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets51.8 +/- 19.0bp
Average Position of motif in Background51.9 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ACCATTGAAA-
--NATTCAAAT
 G T C A T A G C G T A C G C T A A C G T C G A T T A C G C G T A C T G A C T G A A C G T
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACCATTGAAA-
-CCTTTGATGT
 G T C A T A G C G T A C G C T A A C G T C G A T T A C G C G T A C T G A C T G A A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACCATTGAAA-
ATAAACAATTAAACA
 A C G T A C G T A C G T A C G T G T C A T A G C G T A C G C T A A C G T C G A T T A C G C G T A C T G A C T G A A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACCATTGAAA----
AACCCAATAAAATTCG
 A C G T A C G T G T C A T A G C G T A C G C T A A C G T C G A T T A C G C G T A C T G A C T G A A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACCATTGAAA-
-CCAATAAAAC
 G T C A T A G C G T A C G C T A A C G T C G A T T A C G C G T A C T G A C T G A A C G T
A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACCATTGAAA---
---TTTGAAACCG
 G T C A T A G C G T A C G C T A A C G T C G A T T A C G C G T A C T G A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACCATTGAAA--
--NATGGAAAAN
 G T C A T A G C G T A C G C T A A C G T C G A T T A C G C G T A C T G A C T G A A C G T A C G T
A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACCATTGAAA-
-CCAATAAAAA
 G T C A T A G C G T A C G C T A A C G T C G A T T A C G C G T A C T G A C T G A A C G T
A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACCATTGAAA----
CTACCAATAAAATTCT
 A C G T A C G T G T C A T A G C G T A C G C T A A C G T C G A T T A C G C G T A C T G A C T G A A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACCATTGAAA-
-CCTTTGAWGT
 G T C A T A G C G T A C G C T A A C G T C G A T T A C G C G T A C T G A C T G A A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T