Information for 10-GCCTAATCCG (Motif 16)

A T C G A G T C A G T C A C G T C G T A G C T A A C G T T A G C G T A C A T C G
Reverse Opposite:
A T G C A C T G A C T G C G T A C A G T A C G T C G T A A C T G A C T G A T G C
p-value:1e-10
log p-value:-2.391e+01
Information Content per bp:1.860
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.8 +/- 27.6bp
Average Position of motif in Background48.6 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC2/MA0891.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GCCTAATCCG-
-CCTAATCCGC
 A T C G A G T C A G T C A C G T C G T A G C T A A C G T T A G C G T A C A T C G A C G T
A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:forward strand
Alignment:GCCTAATCCG-
-GCTAATCCCC
 A T C G A G T C A G T C A C G T C G T A G C T A A C G T T A G C G T A C A T C G A C G T
A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GCCTAATCCG-----
NNNATTAATCCGNTTNA
 A C G T A C G T A T C G A G T C A G T C A C G T C G T A G C T A A C G T T A G C G T A C A T C G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GCCTAATCCG-----
NNNATTAATCCGNTTNA
 A C G T A C G T A T C G A G T C A G T C A C G T C G T A G C T A A C G T T A G C G T A C A T C G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GCCTAATCCG
-GCTAATCC-
 A T C G A G T C A G T C A C G T C G T A G C T A A C G T T A G C G T A C A T C G
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GCCTAATCCG
--TTAATCCG
 A T C G A G T C A G T C A C G T C G T A G C T A A C G T T A G C G T A C A T C G
A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

PB0185.1_Tcf1_2/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GCCTAATCCG-----
-NNTAATCCNGNCNN
 A T C G A G T C A G T C A C G T C G T A G C T A A C G T T A G C G T A C A T C G A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GCCTAATCCG
-CTTAATCCC
 A T C G A G T C A G T C A C G T C G T A G C T A A C G T T A G C G T A C A T C G
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GCCTAATCCG
--YTAATCCY
 A T C G A G T C A G T C A C G T C G T A G C T A A C G T T A G C G T A C A T C G
A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GCCTAATCCG
--TTAATCCT
 A T C G A G T C A G T C A C G T C G T A G C T A A C G T T A G C G T A C A T C G
A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T