Information for 5-GCTSTTGASCWKYACY (Motif 23)

A C T G A G T C A C G T A T C G A C G T A C G T A C T G C G T A T A C G A G T C C G T A A C G T A G C T C G T A A G T C A G C T
Reverse Opposite:
C T G A A C T G A C G T C T G A G T C A G C A T C T A G A T G C A C G T A G T C C G T A C G T A A T G C C G T A A C T G A G T C
p-value:1e-6
log p-value:-1.408e+01
Information Content per bp:1.845
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.3 +/- 29.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTSTTGASCWKYACY
-CNNTTGACCTTTG--
 A C T G A G T C A C G T A T C G A C G T A C G T A C T G C G T A T A C G A G T C C G T A A C G T A G C T C G T A A G T C A G C T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTSTTGASCWKYACY-
-NNNNTGACCTTTNNNN
 A C T G A G T C A C G T A T C G A C G T A C G T A C T G C G T A T A C G A G T C C G T A A C G T A G C T C G T A A G T C A G C T A C G T
A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCTSTTGASCWKYACY-
-----TGACCTTTNCNT
 A C T G A G T C A C G T A T C G A C G T A C G T A C T G C G T A T A C G A G T C C G T A A C G T A G C T C G T A A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Rarb/MA0857.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCTSTTGASCWKYACY
TGACCTTTTGACCTTT---
 A C G T A C G T A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C T G C G T A T A C G A G T C C G T A A C G T A G C T C G T A A G T C A G C T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTSTTGASCWKYACY
TGACCTTGACCT-----
 A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C T G C G T A T A C G A G T C C G T A A C G T A G C T C G T A A G T C A G C T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTSTTGASCWKYACY
TGACCTTGACCT-----
 A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C T G C G T A T A C G A G T C C G T A A C G T A G C T C G T A A G T C A G C T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GCTSTTGASCWKYACY
TGACCTTTTGACCTC----
 A C G T A C G T A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C T G C G T A T A C G A G T C C G T A A C G T A G C T C G T A A G T C A G C T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCTSTTGASCWKYACY
TTGACCTTTTGACCTT----
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T C G A C G T A C G T A C T G C G T A T A C G A G T C C G T A A C G T A G C T C G T A A G T C A G C T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCTSTTGASCWKYACY
-CTGTTTAC-------
 A C T G A G T C A C G T A T C G A C G T A C G T A C T G C G T A T A C G A G T C C G T A A C G T A G C T C G T A A G T C A G C T
A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCTSTTGASCWKYACY-
-NNNGTGACCTTTGNNN
 A C T G A G T C A C G T A T C G A C G T A C G T A C T G C G T A T A C G A G T C C G T A A C G T A G C T C G T A A G T C A G C T A C G T
A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A