Homer de novo Motif Results (hs_HepatocellularCarcinoma_HepG2_cancer_TCF12_SRX100381_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 797
Total background sequences = 47357
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A G T C T A G C G A T A C T G A G C T G T C A G T C A G C T A A G T C C G T A 1e-25-5.769e+019.66%2.27%24.2bp (32.6bp)Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer(0.952)
More Information | Similar Motifs Found
motif file (matrix)
2 A G C T A C T G G T A C G A T C G A T C A G C T A G T C C G A T T C A G A T C G C A G T A C T G C A T G 1e-20-4.715e+012.26%0.07%17.7bp (30.8bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.862)
More Information | Similar Motifs Found
motif file (matrix)
3 T G A C A G T C G C A T A C G T A C G T T C A G G T C A T G A C G A T C G A T C G A C T C A G T A C T G T G A C T G C A A T C G 1e-18-4.281e+013.89%0.44%26.9bp (26.4bp)NR2F1/MA0017.2/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
4 A G C T A C G T A C T G C G T A A T C G A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C T G 1e-14-3.416e+011.25%0.02%25.5bp (20.8bp)RORA/MA0071.1/Jaspar(0.672)
More Information | Similar Motifs Found
motif file (matrix)
5 G T A C G T A C A C T G A G T C A G T C C T G A A C T G A G T C A G C T A C T G C G T A C T A G A C T G T A G C T A G C A C G T 1e-14-3.231e+010.88%0.01%15.2bp (9.0bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.682)
More Information | Similar Motifs Found
motif file (matrix)
6 A C G T A C T G A T C G G T C A G T A C G T A C G T C A A C T G A G T C A G T C A C G T A C T G C G T A A C T G A G T C A C G T 1e-13-3.111e+010.75%0.00%18.3bp (0.0bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.572)
More Information | Similar Motifs Found
motif file (matrix)
7 * C T A G A G C T T C G A T G A C C G T A C A T G A G C T T G C A A G T C T G C A A C G T C G A T A C G T 1e-10-2.523e+010.63%0.00%20.1bp (0.0bp)PH0084.1_Irx3_2/Jaspar(0.551)
More Information | Similar Motifs Found
motif file (matrix)
8 * C G T A T A C G C T A G C T A G A C T G T A G C C T G A A C T G A C G T A C T G A T C G A C G T A G T C C T G A C G T A A C T G 1e-10-2.523e+010.63%0.00%19.9bp (0.0bp)PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.656)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C T G A C T G C G T A C A T G A G T C C G T A A C T G A T G C T G C A G C A T 1e-10-2.450e+012.51%0.35%23.6bp (27.2bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.712)
More Information | Similar Motifs Found
motif file (matrix)
10 * A T C G A C G T A C G T A C T G A C T G T A C G C G A T A C G T A G T C A T G C 1e-10-2.408e+011.76%0.15%20.2bp (29.7bp)NFIC/MA0161.1/Jaspar(0.664)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C T G A C T G C T A G C T G A A C T G A G T C C G T A A G T C A C G T A G C T C G A T A C T G C G A T 1e-10-2.361e+011.00%0.03%28.9bp (23.7bp)PB0099.1_Zfp691_1/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G T A A G T C C T G A C G A T A C G T A C T G G T A C C T G A A G C T C G T A 1e-9-2.189e+010.88%0.02%21.2bp (34.7bp)MF0006.1_bZIP_cEBP-like_subclass/Jaspar(0.745)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C G T A C G T T G C A C G T A C G T A T C A G A C G T A C G T G A C T G T C A C G T A A G T C A C G T 1e-9-2.178e+010.63%0.01%29.0bp (20.2bp)Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer(0.730)
More Information | Similar Motifs Found
motif file (matrix)
14 * T A G C C G T A G T C A A G T C C G T A A C T G C G A T C G T A A C T G A G C T 1e-8-2.067e+011.13%0.06%21.5bp (29.3bp)PB0050.1_Osr1_1/Jaspar(0.736)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G C T C T G A A G T C T A C G C G T A C A G T A C G T A G T C A G T C A G T C 1e-8-2.045e+011.25%0.08%27.6bp (24.1bp)GFY(?)/Promoter/Homer(0.790)
More Information | Similar Motifs Found
motif file (matrix)
16 * A T C G A T C G T G A C G A C T G T C A C A G T A C G T G A C T G T A C A G T C 1e-8-2.029e+016.78%2.70%27.0bp (28.5bp)NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer(0.734)
More Information | Similar Motifs Found
motif file (matrix)
17 * T A C G T C G A G A C T A T C G G C T A A T C G C A G T G A T C G C T A C G A T 1e-8-2.016e+014.52%1.40%27.3bp (31.9bp)NFE2/MA0841.1/Jaspar(0.973)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C A C G T A C T G A T C G G C T A A G T C G A C T A T C G A G T C A T C G A G T C A G T C G T C A 1e-8-1.992e+010.88%0.03%23.3bp (24.6bp)PB0113.1_E2F3_2/Jaspar(0.656)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G C T G A C T A T G C G A T C A C T G T A C G T C G A C G T A G A C T T A C G 1e-8-1.987e+016.15%2.35%27.3bp (28.5bp)TEAD3/MA0808.1/Jaspar(0.713)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G T A A C T G C T A G T A G C A T G C T A C G 1e-7-1.755e+010.88%0.04%22.1bp (24.8bp)POL010.1_DCE_S_III/Jaspar(0.601)
More Information | Similar Motifs Found
motif file (matrix)
21 * C A G T A T G C A T G C A G T C C T A G T A G C A T G C T A G C T C A G T A C G 1e-7-1.715e+0112.30%6.92%26.5bp (27.9bp)E2F6/MA0471.1/Jaspar(0.839)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C T G C T G A C G T A A C T G A G T C A C G T A T G C A C T G G T C A A G T C G T A C A G C T C T A G A C T G A C T G C G T A 1e-5-1.199e+010.38%0.01%25.4bp (15.1bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.599)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C G T G A T C A G C T A T G C A C T G T G A C T A C G T G A C T C A G C G T A 1e-3-9.028e+001.38%0.34%17.3bp (33.5bp)GFX(?)/Promoter/Homer(0.829)
More Information | Similar Motifs Found
motif file (matrix)