Information for 5-GTTGGSTTCC (Motif 10)

A T C G A C G T A C G T A C T G A C T G T A C G C G A T A C G T A G T C A T G C
Reverse Opposite:
T A C G C T A G G T C A C G T A A T G C A G T C G T A C C G T A C G T A T A G C
p-value:1e-10
log p-value:-2.408e+01
Information Content per bp:1.774
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif71.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets43.7 +/- 20.2bp
Average Position of motif in Background50.2 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTTGGSTTCC
-TTGGCA---
 A T C G A C G T A C G T A C T G A C T G T A C G C G A T A C G T A G T C A T G C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTTGGSTTCC
NTTGGCANN-
 A T C G A C G T A C G T A C T G A C T G T A C G C G A T A C G T A G T C A T G C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTTGGSTTCC
GGTTGGCAT--
 A C G T A T C G A C G T A C G T A C T G A C T G T A C G C G A T A C G T A G T C A T G C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GTTGGSTTCC
TGGCAGTTGG-----
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C T G T A C G C G A T A C G T A G T C A T G C
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGGSTTCC-
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C T G T A C G C G A T A C G T A G T C A T G C A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTTGGSTTCC
NNTTGGCANN-
 A C G T A T C G A C G T A C G T A C T G A C T G T A C G C G A T A C G T A G T C A T G C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GTTGGSTTCC
CACGGCAGTTGGTNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C T G T A C G C G A T A C G T A G T C A T G C
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTTGGSTTCC---
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C T G T A C G C G A T A C G T A G T C A T G C A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTTGGSTTCC
CCGATTGGCT---
 A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C T G T A C G C G A T A C G T A G T C A T G C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTTGGSTTCC
GAATGTTTGTTT--
 A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C T G A C T G T A C G C G A T A C G T A G T C A T G C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T