Information for 1-MCWTTGACCCTTKMAG (Motif 3)

T G A C A G T C G C A T A C G T A C G T T C A G G T C A T G A C G A T C G A T C G A C T C A G T A C T G T G A C T G C A A T C G
Reverse Opposite:
T A G C A C G T A C T G T G A C G T C A C T G A C T A G C T A G A C T G A C G T A G T C G T C A G T C A C G T A C T A G A C T G
p-value:1e-18
log p-value:-4.281e+01
Information Content per bp:1.602
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.89%
Number of Background Sequences with motif210.1
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets46.3 +/- 26.9bp
Average Position of motif in Background49.9 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:MCWTTGACCCTTKMAG
CNNTTGACCTTTG---
 T G A C A G T C G C A T A C G T A C G T T C A G G T C A T G A C G A T C G A T C G A C T C A G T A C T G T G A C T G C A A T C G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----MCWTTGACCCTTKMAG
GTTGACCTTTGACCTTT----
 A C G T A C G T A C G T A C G T A C G T T G A C A G T C G C A T A C G T A C G T T C A G G T C A T G A C G A T C G A T C G A C T C A G T A C T G T G A C T G C A A T C G
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:MCWTTGACCCTTKMAG
NNNNTGACCTTTNNNN
 T G A C A G T C G C A T A C G T A C G T T C A G G T C A T G A C G A T C G A T C G A C T C A G T A C T G T G A C T G C A A T C G
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-MCWTTGACCCTTKMAG
NNANTTGACCCCTNNNN
 A C G T T G A C A G T C G C A T A C G T A C G T T C A G G T C A T G A C G A T C G A T C G A C T C A G T A C T G T G A C T G C A A T C G
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----MCWTTGACCCTTKMAG
ATTGGACTTTGACCCC-----
 A C G T A C G T A C G T A C G T A C G T T G A C A G T C G C A T A C G T A C G T T C A G G T C A T G A C G A T C G A T C G A C T C A G T A C T G T G A C T G C A A T C G
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---MCWTTGACCCTTKMAG
TGACCTTTGACCCC-----
 A C G T A C G T A C G T T G A C A G T C G C A T A C G T A C G T T C A G G T C A T G A C G A T C G A T C G A C T C A G T A C T G T G A C T G C A A T C G
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---MCWTTGACCCTTKMAG
TGACCTTTGACCCC-----
 A C G T A C G T A C G T T G A C A G T C G C A T A C G T A C G T T C A G G T C A T G A C G A T C G A T C G A C T C A G T A C T G T G A C T G C A A T C G
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---MCWTTGACCCTTKMAG
TGACCTTTGACCTN-----
 A C G T A C G T A C G T T G A C A G T C G C A T A C G T A C G T T C A G G T C A T G A C G A T C G A T C G A C T C A G T A C T G T G A C T G C A A T C G
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C A C G T A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---MCWTTGACCCTTKMAG
TGACCTTTGACCCC-----
 A C G T A C G T A C G T T G A C A G T C G C A T A C G T A C G T T C A G G T C A T G A C G A T C G A T C G A C T C A G T A C T G T G A C T G C A A T C G
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--MCWTTGACCCTTKMAG
TGACCTTGACCT------
 A C G T A C G T T G A C A G T C G C A T A C G T A C G T T C A G G T C A T G A C G A T C G A T C G A C T C A G T A C T G T G A C T G C A A T C G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T