Information for 5-GRAGCKSKMCMTGGGA (Motif 22)

A C T G C T G A C G T A A C T G A G T C A C G T A T G C A C T G G T C A A G T C G T A C A G C T C T A G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C C T G A A C T G A C T G A C G T T G A C A T C G G T C A A C T G A G T C A C G T A G C T A G T C
p-value:1e-5
log p-value:-1.199e+01
Information Content per bp:1.842
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.7 +/- 25.4bp
Average Position of motif in Background32.2 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:GRAGCKSKMCMTGGGA---
---------CSTGGGAAAD
 A C T G C T G A C G T A A C T G A G T C A C G T A T G C A C T G G T C A A G T C G T A C A G C T C T A G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GRAGCKSKMCMTGGGA
NGAAGC-----------
 A C G T A C T G C T G A C G T A A C T G A G T C A C G T A T G C A C T G G T C A A G T C G T A C A G C T C T A G A C T G A C T G C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GRAGCKSKMCMTGGGA
CGGAGC-----------
 A C G T A C T G C T G A C G T A A C T G A G T C A C G T A T G C A C T G G T C A A G T C G T A C A G C T C T A G A C T G A C T G C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GRAGCKSKMCMTGGGA----
GGAGCTGTCCATGGTGCTGA
 A C T G C T G A C G T A A C T G A G T C A C G T A T G C A C T G G T C A A G T C G T A C A G C T C T A G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GRAGCKSKMCMTGGGA-----
GGCGCTGTCCATGGTGCTGAA
 A C T G C T G A C G T A A C T G A G T C A C G T A T G C A C T G G T C A A G T C G T A C A G C T C T A G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GRAGCKSKMCMTGGGA
-CAGCC----------
 A C T G C T G A C G T A A C T G A G T C A C G T A T G C A C T G G T C A A G T C G T A C A G C T C T A G A C T G A C T G C G T A
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GRAGCKSKMCMTGGGA--
------TCCCCTGGGGAC
 A C T G C T G A C G T A A C T G A G T C A C G T A T G C A C T G G T C A A G T C G T A C A G C T C T A G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.48
Offset:7
Orientation:forward strand
Alignment:GRAGCKSKMCMTGGGA-
-------WDNCTGGGCA
 A C T G C T G A C G T A A C T G A G T C A C G T A T G C A C T G G T C A A G T C G T A C A G C T C T A G A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GRAGCKSKMCMTGGGA---
----RGSMTBCTGGGAAAT
 A C T G C T G A C G T A A C T G A G T C A C G T A T G C A C T G G T C A A G T C G T A C A G C T C T A G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.47
Offset:7
Orientation:forward strand
Alignment:GRAGCKSKMCMTGGGA-
-------RTCATGTGAC
 A C T G C T G A C G T A A C T G A G T C A C G T A T G C A C T G G T C A A G T C G T A C A G C T C T A G A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C